Gene Ccel_0180 details

Gene Information

• Locus tag: Ccel_0180
• ID: 7309084
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 203708
• End bp: 204358
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643607109
• Product: protein of unknown function UPF0029
• Protein accession: YP_002504548
• Protein GI: 220927639
• COG category: [S] Function unknown
• COG ID: [COG1739] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00257] uncharacterized protein, YigZ family

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.190284
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTTAACTG AATATAAAAC AATATTGAAT ACCGCAGAAG CGGAGTTTGA AGAAAAGAAG 
TCCAGATTTA TAGCCAATGT CCGTCCTATA ACATGTGAGG AAGAAGCATT GGAATTTATC 
GAAGAAATGA GATCAAAGTA CTGGAACGCA ACACATAATG TGTATGCTTA CAGTATAAAC 
AATGGTACAT TGGTTCAACG ATACAGCGAT GACGGGGAGC CTTCAGGAAC AGCAGGAATG 
CCGACCCTCG AAGTAATAAA GCGTATGGGC CTGCAGGATG TTGTTGTAGT GGTGACACGC 
TATTTTGGCG GAACCTTGCT GGGTGCTTCC GGCCTTATAC GTGCCTACAG CAAGGGTGCC 
TCCCTTGGAC TTGAGGCTGC TGAAATAGTT ACCCGTAAGC TATGCTATAA CCTGAATATT 
ATAATTGAAT ACACTATCTT TGGGCGCCTG CAGAACATGC TCATTTCAAA CAATAATATA 
ATAAAGGACA TCAGATATGA ACAGGATGTT GAACTTTGCG TTCTTATAGA GGTTGGAAAT 
GAGGAAGAAC TTATGAAGGA TATTGTAGAG GTCTCCAATG GAAGGGCCGT CATTGACCTT 
GGAGAAAAAA CTTACATTAC ATTGGGCAGT GACGGAAGGT TGATTATTTA A 

 

Protein sequence

MLTEYKTILN TAEAEFEEKK SRFIANVRPI TCEEEALEFI EEMRSKYWNA THNVYAYSIN 
NGTLVQRYSD DGEPSGTAGM PTLEVIKRMG LQDVVVVVTR YFGGTLLGAS GLIRAYSKGA 
SLGLEAAEIV TRKLCYNLNI IIEYTIFGRL QNMLISNNNI IKDIRYEQDV ELCVLIEVGN 
EEELMKDIVE VSNGRAVIDL GEKTYITLGS DGRLII