Gene Caul_5380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5380 
Symbol 
ID5897188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp90015 
End bp90608 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content55% 
IMG OID641550670 
ProductTetR family transcriptional regulator 
Protein accessionYP_001672156 
Protein GI167621648 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.768843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.61228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGACA CGCGTACCGC AATTCTCGAT GCCGCCGCTC GGCTCTATGC GGCGGACGGT 
TATTCCGCCG TCTCTATGCG AGACGTCGCC ACCGAAGTCT CGATGACGCA GGCTAACCTA
TACTATCATT TTCGAGACAA GGCGCAGCTG GTCGAGGATA CGCTTGAGCA TGTCCTGGTT
ACAAGAATGT CCTCTCTGGA GGATTTGTTC AAAACGACTG CTTCTCCGGA ATATAAGTTG
CAGTTTTTTG TCGAGTGGTT CGTGACGCTC TTGTTTAATG ATCTGATATT TACGCAACTG
ATGCTGCGCG AGTTGATCGA CGGCGATATG GAAAGAGTCG CGCGCCTCTC GAGAGCGGTC
TTCGACAAGC CGTTCTCGCT GATTGACGGG ATCGTCTCAG CCTATTCGCC TGGCAAGAAC
TCAACCCTGA CGACGGCGTC CGTCATCGCC CTCATCATCG GGCACGTCCA GATGGCGCGC
ATTCTTCCAT ATCTGTCCAG CGGCCACGCT GATCACGCCG ATCCGAAAAT CATCGCCGCA
CATGTTCTTT CCACCCTGCA GCGCGCGCTC AAGGACCAAT CCGATGCCCT TTAG
 
Protein sequence
MTDTRTAILD AAARLYAADG YSAVSMRDVA TEVSMTQANL YYHFRDKAQL VEDTLEHVLV 
TRMSSLEDLF KTTASPEYKL QFFVEWFVTL LFNDLIFTQL MLRELIDGDM ERVARLSRAV
FDKPFSLIDG IVSAYSPGKN STLTTASVIA LIIGHVQMAR ILPYLSSGHA DHADPKIIAA
HVLSTLQRAL KDQSDAL