Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5380 |
Symbol | |
ID | 5897188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010333 |
Strand | + |
Start bp | 90015 |
End bp | 90608 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641550670 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001672156 |
Protein GI | 167621648 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.768843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.61228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACCGACA CGCGTACCGC AATTCTCGAT GCCGCCGCTC GGCTCTATGC GGCGGACGGT TATTCCGCCG TCTCTATGCG AGACGTCGCC ACCGAAGTCT CGATGACGCA GGCTAACCTA TACTATCATT TTCGAGACAA GGCGCAGCTG GTCGAGGATA CGCTTGAGCA TGTCCTGGTT ACAAGAATGT CCTCTCTGGA GGATTTGTTC AAAACGACTG CTTCTCCGGA ATATAAGTTG CAGTTTTTTG TCGAGTGGTT CGTGACGCTC TTGTTTAATG ATCTGATATT TACGCAACTG ATGCTGCGCG AGTTGATCGA CGGCGATATG GAAAGAGTCG CGCGCCTCTC GAGAGCGGTC TTCGACAAGC CGTTCTCGCT GATTGACGGG ATCGTCTCAG CCTATTCGCC TGGCAAGAAC TCAACCCTGA CGACGGCGTC CGTCATCGCC CTCATCATCG GGCACGTCCA GATGGCGCGC ATTCTTCCAT ATCTGTCCAG CGGCCACGCT GATCACGCCG ATCCGAAAAT CATCGCCGCA CATGTTCTTT CCACCCTGCA GCGCGCGCTC AAGGACCAAT CCGATGCCCT TTAG
|
Protein sequence | MTDTRTAILD AAARLYAADG YSAVSMRDVA TEVSMTQANL YYHFRDKAQL VEDTLEHVLV TRMSSLEDLF KTTASPEYKL QFFVEWFVTL LFNDLIFTQL MLRELIDGDM ERVARLSRAV FDKPFSLIDG IVSAYSPGKN STLTTASVIA LIIGHVQMAR ILPYLSSGHA DHADPKIIAA HVLSTLQRAL KDQSDAL
|
| |