Gene Caul_5307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5307 
Symbol 
ID5897085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp17757 
End bp18524 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID641550600 
ProductIclR family transcriptional regulator 
Protein accessionYP_001672086 
Protein GI167621578 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.144609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0901346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAC CTGATCAGTC CGTCGTTAAG TCCGCCGCCC GGACCCTGGA AATTTTTGAA 
TACTTCGACG AAGTCCGCAG GCCTGCGCAT ATCCAGGACG TGGCCTTGGC GCTAGGCTAT
CCACATTCCA GCACTGCGGC GCTACTCCGC AGCCTTGCCG ATCTCGGCTA CCTGGAGTTT
TCCTCCGACG ACAAGACATT CTTTCCATCC ATCCGGGTCT CCCTGCTCGG TCACTGGGTT
GGCGACGAAA TCCTCCCGCT CCGGCGCATT CAGCAGCAGA TGCGTGACAT CGCAGAGCAA
ACCCAGATGA CCGTGGTGCT GGGTGCGGCG AGCGGCGGCT ACTGCCAGTA CGTCCGCGTG
ATCGAGGGCG CGACGCCGAT CCGCTACCAC GTCAAGGCGG GTACGCGGCG ATGCCTTGCT
CGCTCGACAC TGGGCCGCGT GCTGCTGGCC ATGGCCCCTC CTGATCGCAG GGCCCGGCTG
ATCGCCGAAG GCCTGGCGGT GTGGGACGGC GATGAAGCGC CGCCGCCCGC CGAGGGGGTC
GCCAGAGACG TTGCCCAGGT CGCTGCCCGA GGACACGCCT TCCATGCCGG CCTAGTCAAC
GACAACGCCG CGATGCTGGC CATCCCCCTC TCGGTCAGTC CGCCCGCACA TCCGCTGGCC
CTTGGCCTGG CCGCCCCCAA GGACCTGTTC CGGGGTCGCC GCGCCGAGTT GCTCAAAATC
ATAGGCGACG TGCTCGGAAG CCCGGGCCCG GCCCACAAGA CCGCCTGA
 
Protein sequence
MPKPDQSVVK SAARTLEIFE YFDEVRRPAH IQDVALALGY PHSSTAALLR SLADLGYLEF 
SSDDKTFFPS IRVSLLGHWV GDEILPLRRI QQQMRDIAEQ TQMTVVLGAA SGGYCQYVRV
IEGATPIRYH VKAGTRRCLA RSTLGRVLLA MAPPDRRARL IAEGLAVWDG DEAPPPAEGV
ARDVAQVAAR GHAFHAGLVN DNAAMLAIPL SVSPPAHPLA LGLAAPKDLF RGRRAELLKI
IGDVLGSPGP AHKTA