Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5279 |
Symbol | |
ID | 5897437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010335 |
Strand | + |
Start bp | 220676 |
End bp | 221311 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641555382 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001676713 |
Protein GI | 167621928 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00504673 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACTC CATCCGCCTC CCCTCGCAAA CGTCGTCCCC AGGCCGAGCG CAGCGCCGAC ATGCGCGCCC GACTGATCCA GGCGGCGATC ACCTGCCTCA ATCGCAACGG CTACAGCGCC ACCACCGTGA CCAGCGTGGC CGATGAAGCC GGCGCCAGCC GCGGCGCCTT CACCCACCAG TTTCCGGCCA AGACCGATCT GATGCTGGCG GTCGTGCAGG CTGTGTTTGA AAGCGACTCG GCGGCCTACA ACCAGACCAT CGAGGCGATG GCGCCGGCCC AGTGGCTGAT GGCGCTGCCC CAAACCATGT GGGGGGTGAT GAGCCGTCCC TCCGGCATCG CGGTCATGGA AATCATGCTC GCCTCGCGCT CGGACCCGGA ACTGGCCGAG AAGTTGCGCG CCCAGCAAAA ACTGATCGAC GAGCGCGCAC ACCAGTGGAG CGCCGAGCGC ATACGCGCCG CGGGGCTGGA TCCCATCCCC GAGGCCGAAG CGGTGCACGA GCTTTATGTC GCCGCCGTCC GGGGCCTGGC CCTGGAAGCG GTGTTCATGA ACAACGCCGA CGGCGTCCAG CGATCCCTGC AAGTCCTGAC CGACATGATG CGCCGCTTCT ATCCGGCCAT CGAAGACAAA CTCTAG
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Protein sequence | MKTPSASPRK RRPQAERSAD MRARLIQAAI TCLNRNGYSA TTVTSVADEA GASRGAFTHQ FPAKTDLMLA VVQAVFESDS AAYNQTIEAM APAQWLMALP QTMWGVMSRP SGIAVMEIML ASRSDPELAE KLRAQQKLID ERAHQWSAER IRAAGLDPIP EAEAVHELYV AAVRGLALEA VFMNNADGVQ RSLQVLTDMM RRFYPAIEDK L
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