Gene Caul_4920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4920 
Symbol 
ID5902382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5315819 
End bp5316814 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content63% 
IMG OID641565440 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001686538 
Protein GI167648875 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.46785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGATC GTCCTTCGAC CGAACGCGTG CTCGTTACCG GCGCCGCAGG TTTCATTGGC 
TATCACCTAG CCAAGCGCCT GGCGGACGAC GGCCACCATG TCGTCTGCGC CGACAACATG
ATCCGCGGCG AGGACGACGA GGCCTATCGC GCGCTTTGCG AACGACCCAA CGTCACCCGC
GTCGATATCG ACCTGACCGA CCAGGCCGCC GTGCGCGGCC TGCCGGACGA CATCGATCGC
GTGTTCCACC TGGCCGCCAT GAACGGGACG CAGAACTTCT ACGAGCGCCC GTTCGAGGTC
ATGCGGTGCT GCACCCTGCC GACCATCTTC CTGCTGGAGA AGTATGGTCC GCTCGGGCTC
AAGCGTTTCG TCTACACCGG GACCAGCGAG GCCTACGCCT CGACGGTCAC CCAGTTCAAC
TGGCCGGTGC CGACGGGCGA GGACGTGCCG CTCTCGATCG ACGATCCCAG CAATGTCCGC
TGGTCATACG GCGCCTCGAA GATGCATGGC GAGGTGGCCA CGCAATGCGC GGCCAAGTTC
TTCGACCTGC GCTTCACGGT CATCCGCTAC CACAACGTCT ACGGCCCGCG GATGGGCGAT
AAGCACGTGG TGCCGGACTT CCTGATCCGG GCTCGCGACG GCGTACTGTC CCTGTACGGC
CACGAGGACA CGCGCGCGTT CCTCTATATC GATGACGCCG TCGAGGCGAC GTTGCGCGTC
GCGCAGATGG ACGCCTGCGA GGGCGAGACG ATCAACATCG GCGCCGAACA GGAAATGACG
ATCCGCGACC TGGGCGAAGC CATGAAGCGC ATCGCTGGCC TGGAGGGCGA AATCACGCTC
CACCCCTCGC CCAAAGGTAG TGTCAAGCGG CGGGCGCCAA AGGTCGAAAA ACTAAAACAT
TTGACCAACT TCCATGAGAC GTGGTCCCTG GAGGACGGGC TTCGCGAAAC CGCGAAATAC
TACTTATGCG GTCAGGTTGG AGACGCGAAC AAATGA
 
Protein sequence
MTDRPSTERV LVTGAAGFIG YHLAKRLADD GHHVVCADNM IRGEDDEAYR ALCERPNVTR 
VDIDLTDQAA VRGLPDDIDR VFHLAAMNGT QNFYERPFEV MRCCTLPTIF LLEKYGPLGL
KRFVYTGTSE AYASTVTQFN WPVPTGEDVP LSIDDPSNVR WSYGASKMHG EVATQCAAKF
FDLRFTVIRY HNVYGPRMGD KHVVPDFLIR ARDGVLSLYG HEDTRAFLYI DDAVEATLRV
AQMDACEGET INIGAEQEMT IRDLGEAMKR IAGLEGEITL HPSPKGSVKR RAPKVEKLKH
LTNFHETWSL EDGLRETAKY YLCGQVGDAN K