Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4093 |
Symbol | |
ID | 5901555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4445200 |
End bp | 4446744 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641564613 |
Product | outer membrane efflux protein |
Protein accession | YP_001685715 |
Protein GI | 167648052 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.66979 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCAG AGCTGGTCGC CGAAGCTTCT TTCCCCGGGC CTCCGCGTCA GGCTTGGCGC TTGGCCGCCT TGACGGCGTT GGCGATCCTG GTCGCGGCCC AACCCGGCGG GTCGCCCGCC CAAGGCGCCC GCCCGCCTGT CGCCTCGCCC CCGAGTCCGA CGCCAACCGC GAACGGACCG CGCCTGCCGC TGAGCTTGGC CGACGCCGTG TTCATCGGGC TCCGCGACAA TCGCACCGTC AAGTCGGCCT ACCTCAGCCG TGTGGCCGAG AAATATGACC TCTTCGTCGC CGAAGCGCGA TTTCGCCCCG TCGCCGTGAT CGTCGGAAGC GTCGAGGCCA ACCGTCAGGG GGACGCGCAT GGCGCGACCA GCCAGTTGAG TCCCGCCGCA TCCTGGCTGC TTCCCACCGG CGCAACGTTC GACTTTGGTT GGGCGCGTCA GACCACGCGC GGGCGCGGCG CCAGCTTCAC CACCGAGGTG GCGAGCGTCG GCGTCAACCA GCCGCTCTTG CGAGGCGCGG GGCTGGCGGT GAACAACGCG CCCGTCCGGC TGGCTCAGTT GCAGGAGGCC ATCAACCGCC TGAACCTCAA GACCACGGTT TCGGGAACGG TCACCGGCAT CATCACGGCC TATCGAAACC TGGCCCAGGC CCAACAGCAG CTGGTGATCG CCCGCCAGTC CCTGGAACGC TCGAACGCCC AACTGTCGAC CAACCAGGCG CTGATCGAGG CCGGCCGCAT GGCCGCCGCC GACATCGTCC AGACCCAGGC CGACATCGCC GGCCAGCAGG TCTCGCTGTT GCAGGCCGAA CAGCAGCGCA ACAGCGCCCA ACTGGCCTTG CTGACCTTGC TGGCCATGGA CCTGCACACC GACGTCGTCG CGGCCGACCC CCTGGACGCT GACTATGTGC CGATCGACCT GGCGCAGGCC ATCGCTGTCG CCCTGGACAA TCGGCCGGAC TATCTGGGCC AAAGACGAGC GCTCGAGCAG GCGCGGCAGG GCCTTGTCGT CGCGCGCAAC AATCGCCTTT GGGATGTCTC GGTCTACGGG ACCCTGCAGC ACCAGAGCGA CCGCGGCGCG TCCTTTCTGG ACCCGACGGA CGGCGCGCCG ACCGGCGCCA ACCTGCCTCG GACCAACAGC GCGGTGGGCG TGCAGTTTCG AATCCCCTTG GGTGACTACA GTTTACGGCA GGGCGAGATC CAGGCCTCCA CCCAGGTCCG CATTCAGGAA ATCCAGGTCG AGGACCTGCG ACAGCGGGTC GAGGCCCAGG TGCGCGACGC CGTCCAAGGC GTCGAGCTGG CTTGGCGCCA GGTGGAGGCC GCCCGCCTGG CGCGGAATCT GGCGGCGCGA ACCCTGGATC TGGAGCGCGA GCGCCTCCAG GCCGGCCGCG CCTCGAATTT CGAGCTGCTG ACCTTCGAGG CCAATCTGCG CTCGGCGGAC CTTCAGGCCT TGAACGCCTC CATCAACTAC AAGAACGCGC TCACCTCGCT CGACCAGCAG TTGGGAACGA CCCTGGATAC TTGGAAGATC GATCTGCGGG ACTAG
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Protein sequence | MSAELVAEAS FPGPPRQAWR LAALTALAIL VAAQPGGSPA QGARPPVASP PSPTPTANGP RLPLSLADAV FIGLRDNRTV KSAYLSRVAE KYDLFVAEAR FRPVAVIVGS VEANRQGDAH GATSQLSPAA SWLLPTGATF DFGWARQTTR GRGASFTTEV ASVGVNQPLL RGAGLAVNNA PVRLAQLQEA INRLNLKTTV SGTVTGIITA YRNLAQAQQQ LVIARQSLER SNAQLSTNQA LIEAGRMAAA DIVQTQADIA GQQVSLLQAE QQRNSAQLAL LTLLAMDLHT DVVAADPLDA DYVPIDLAQA IAVALDNRPD YLGQRRALEQ ARQGLVVARN NRLWDVSVYG TLQHQSDRGA SFLDPTDGAP TGANLPRTNS AVGVQFRIPL GDYSLRQGEI QASTQVRIQE IQVEDLRQRV EAQVRDAVQG VELAWRQVEA ARLARNLAAR TLDLERERLQ AGRASNFELL TFEANLRSAD LQALNASINY KNALTSLDQQ LGTTLDTWKI DLRD
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