Gene Caul_4014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4014 
Symbol 
ID5901476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4347030 
End bp4348346 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content69% 
IMG OID641564535 
Productmajor facilitator transporter 
Protein accessionYP_001685637 
Protein GI167647974 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.242843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC CCTCCCCCCT TCTTCAAGCC GGACTGGACG CCCCCGCACG CCCCGCGGCG 
TCGGGCCGCG GCGCCTGGCT GGTCCTGGCC ATGCTGTGGT TCGTCTATGT CCTGAACTTC
CTCGACCGAC AGCTGATGTC GATCCTGGCC AAGCCGATCC AGGATGCGCT GCATGTCACC
GACGGCCAGC TGGGCCTGAT CGGCGGCCTC TATTTCGCGA TGTTCTACTG CTTCATCGCC
ATTCCGGTGG GATGGCTGGC CGACCGCACC AACCGTGTGG CGGTCCTGTC CCTGGCCTGC
GGAATCTGGA GCATGGCGAC GGCCGCCTGC GGATTCTCGG CCAACTACGC GCAGTTCGCC
GTCTCTCGCA TGACCGTCGG CTTTGGCGAG GCCGGCGGCG TTCCCCCCTC CTACGCCATC
ATCTGCGACT ATTTTCCGCC CGGACAGCGC GGCACGGCAT TGAGCGTCTA CAACCTGGGT
CCGCCGGTCG GGGCGGCGCT GGGCATCGCC TTCGGCGCGG CGATCGCCGC GGCCTTCAAC
TGGCGCTACG CCTTCGTGGT GCTGGGCCTC GTCGGCGTGC TGGCGGCGAT CGCCCTGCCC
CTGGTGGTGC GCGAGCCGCC CCGCGGCGGC ATGGATCCGG TCGGCGCGGC GCCGCCAATC
CAGAAGGCCA GCTTCTGGTC GACCCTGACG ATGTTCTTCT CCCGGCCGCC GCTGGTGCTC
GCGGCGCTCG GCAGCGGGGC GACGCAGTTC GTCACCTATG GCCTGGGCAA CTTCGCCACC
CTGTTCCTGA TGCGCGAAAA GGGCATGACC CTCTCGGAGG TCGCCCTCTG GTACGCGCTG
GTGGTGGGCG TCGGCATGAG CGCGGGGATC TTCGTGTCGG GCCGGGTGAT CGACCGCTTC
ACCCGGCGGT CCAAGATCGC CTACGCCCTG GCGCCGGCGA TCTCCCTGAC CCTGGCCATT
CCGTTCTATA TCGGCTTCGT CTGGGCGCCG ACCTGGCCCC TGGCCCTGGC GTTCCTGATC
GGGCCGACCT TCCTCAACTA CTTCTACCTG TCCTCGTCGG TGGCGCTGGT GCAACAGGAG
GTGCGGCCGG ACCAGCGGGT GATGGCCGGG GCGCTGCTGC TGCTGGTGAT GAACTTCATC
GGCCTGGGCC TGGGCCCCAC CTATGTCGGC GCCGCCAGCG ACTTTTTCCG CGCCAGCCAT
CCGCACAACT CGCTGCAGAT GGCGCTCTAC ACCCTGATCC CGTTCTACGT CCTGGCGGTG
GGGCTGTTCC TATGGCTGGC CCGGATCTTC GCCCGGGCCG AGGGCGGCGA GGCCTAG
 
Protein sequence
MTAPSPLLQA GLDAPARPAA SGRGAWLVLA MLWFVYVLNF LDRQLMSILA KPIQDALHVT 
DGQLGLIGGL YFAMFYCFIA IPVGWLADRT NRVAVLSLAC GIWSMATAAC GFSANYAQFA
VSRMTVGFGE AGGVPPSYAI ICDYFPPGQR GTALSVYNLG PPVGAALGIA FGAAIAAAFN
WRYAFVVLGL VGVLAAIALP LVVREPPRGG MDPVGAAPPI QKASFWSTLT MFFSRPPLVL
AALGSGATQF VTYGLGNFAT LFLMREKGMT LSEVALWYAL VVGVGMSAGI FVSGRVIDRF
TRRSKIAYAL APAISLTLAI PFYIGFVWAP TWPLALAFLI GPTFLNYFYL SSSVALVQQE
VRPDQRVMAG ALLLLVMNFI GLGLGPTYVG AASDFFRASH PHNSLQMALY TLIPFYVLAV
GLFLWLARIF ARAEGGEA