Gene Caul_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4008 
Symbol 
ID5901470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4338707 
End bp4339804 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content66% 
IMG OID641564529 
ProductTonB-dependent receptor plug 
Protein accessionYP_001685631 
Protein GI167647968 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.139697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAC TAGCTTATAC GGTGTCGCTG CTTGCGCTGA CGCTCGCCGC CGCGCCCGCC 
GTCGCGCAGA CCAGCGCCGC GCCGGCCGCC GCGACCAATC CACAGGCCGT GACCAATCTG
GACGAGATCA TCGTCACGGC CACCCGCCGC AGCGAGCGCC TTCAGGACGT TCCGCTCAGC
GTCACCGCCT TCTCGCAGAC CGAGCTGACC CAGAAGGGCA TCGTCGGCTT CGAGGGCATC
GCGCGCCAGA CGCCCGGCGT CGTGCTGAAC AAGGCCAGCG ACAACAACGC CCGGTTCACG
GTCCGGGGCA TCTCCACCAA TGGCTGGGGC GCCGGGCTGC AGACCACCAC CACCATCTAT
CTCGACGAGC TGCCGCTCAG CACGATCGGC AATACGGTGA CGCTCGATCC CAGTCTGTTC
GACGTCGAGC GGGTCGAGTT CCTGCGCGGT CCGCAGGGCA CGCTGTTCGG CTCGGGGTCG
CTGTCGGGCG CGCTGCGCGT CCTGACCAAG AGCCCCGACC TCAAGAACCA CGCCGCGTCC
GCCCTCATCG ACCTGGGCTA CACGCCGGAT GGCGACGGCG TTCGCCAGCG CTACAACGCC
ATGGTCAATA TTCCGCTGGT CGAGGACATC CTGGGGCTGC GCGTCGTCGG CTTCTCGCGC
AACGAGGACG GGTTCGTCGA CAATGTCGGG ACGGGCGCCA AGAATTCCAA CGCGCTGATC
GACTGGGGCG GCCGCGCGAT CCTGCTGTGG AAGCCGAACG ACCGGCTCAG CATCCGGCTG
CTGGGGTCCT ACGAGAACAG CGATCCCAGG GACTCTTCGC TGACCTCGCC GTCGTTGGGC
GACCGCAAGC GCTACAGCAC GATCCCGGAC CAGTACACGT CCAAGACGCG GATCTACAAT
GGCACGCTCG ACTATCAGTT CGACGGGGCG CGCCTGACCA GCTCATCGAC CTATTCGATC
GCCGACAGCC TGTTCAATGT CGATCTCGCC GGCACGTTCA ACCTGGCCGT TCCGTTCTAT
CTCTATGACG GTTTCAAATC GAAGACCTTC GTCCAGGAGA CGCGGCTGGC CTCGGACCCG
GGCGGCAAGG TCGACTGA
 
Protein sequence
MSRLAYTVSL LALTLAAAPA VAQTSAAPAA ATNPQAVTNL DEIIVTATRR SERLQDVPLS 
VTAFSQTELT QKGIVGFEGI ARQTPGVVLN KASDNNARFT VRGISTNGWG AGLQTTTTIY
LDELPLSTIG NTVTLDPSLF DVERVEFLRG PQGTLFGSGS LSGALRVLTK SPDLKNHAAS
ALIDLGYTPD GDGVRQRYNA MVNIPLVEDI LGLRVVGFSR NEDGFVDNVG TGAKNSNALI
DWGGRAILLW KPNDRLSIRL LGSYENSDPR DSSLTSPSLG DRKRYSTIPD QYTSKTRIYN
GTLDYQFDGA RLTSSSTYSI ADSLFNVDLA GTFNLAVPFY LYDGFKSKTF VQETRLASDP
GGKVD