Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4008 |
Symbol | |
ID | 5901470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4338707 |
End bp | 4339804 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641564529 |
Product | TonB-dependent receptor plug |
Protein accession | YP_001685631 |
Protein GI | 167647968 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.139697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAC TAGCTTATAC GGTGTCGCTG CTTGCGCTGA CGCTCGCCGC CGCGCCCGCC GTCGCGCAGA CCAGCGCCGC GCCGGCCGCC GCGACCAATC CACAGGCCGT GACCAATCTG GACGAGATCA TCGTCACGGC CACCCGCCGC AGCGAGCGCC TTCAGGACGT TCCGCTCAGC GTCACCGCCT TCTCGCAGAC CGAGCTGACC CAGAAGGGCA TCGTCGGCTT CGAGGGCATC GCGCGCCAGA CGCCCGGCGT CGTGCTGAAC AAGGCCAGCG ACAACAACGC CCGGTTCACG GTCCGGGGCA TCTCCACCAA TGGCTGGGGC GCCGGGCTGC AGACCACCAC CACCATCTAT CTCGACGAGC TGCCGCTCAG CACGATCGGC AATACGGTGA CGCTCGATCC CAGTCTGTTC GACGTCGAGC GGGTCGAGTT CCTGCGCGGT CCGCAGGGCA CGCTGTTCGG CTCGGGGTCG CTGTCGGGCG CGCTGCGCGT CCTGACCAAG AGCCCCGACC TCAAGAACCA CGCCGCGTCC GCCCTCATCG ACCTGGGCTA CACGCCGGAT GGCGACGGCG TTCGCCAGCG CTACAACGCC ATGGTCAATA TTCCGCTGGT CGAGGACATC CTGGGGCTGC GCGTCGTCGG CTTCTCGCGC AACGAGGACG GGTTCGTCGA CAATGTCGGG ACGGGCGCCA AGAATTCCAA CGCGCTGATC GACTGGGGCG GCCGCGCGAT CCTGCTGTGG AAGCCGAACG ACCGGCTCAG CATCCGGCTG CTGGGGTCCT ACGAGAACAG CGATCCCAGG GACTCTTCGC TGACCTCGCC GTCGTTGGGC GACCGCAAGC GCTACAGCAC GATCCCGGAC CAGTACACGT CCAAGACGCG GATCTACAAT GGCACGCTCG ACTATCAGTT CGACGGGGCG CGCCTGACCA GCTCATCGAC CTATTCGATC GCCGACAGCC TGTTCAATGT CGATCTCGCC GGCACGTTCA ACCTGGCCGT TCCGTTCTAT CTCTATGACG GTTTCAAATC GAAGACCTTC GTCCAGGAGA CGCGGCTGGC CTCGGACCCG GGCGGCAAGG TCGACTGA
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Protein sequence | MSRLAYTVSL LALTLAAAPA VAQTSAAPAA ATNPQAVTNL DEIIVTATRR SERLQDVPLS VTAFSQTELT QKGIVGFEGI ARQTPGVVLN KASDNNARFT VRGISTNGWG AGLQTTTTIY LDELPLSTIG NTVTLDPSLF DVERVEFLRG PQGTLFGSGS LSGALRVLTK SPDLKNHAAS ALIDLGYTPD GDGVRQRYNA MVNIPLVEDI LGLRVVGFSR NEDGFVDNVG TGAKNSNALI DWGGRAILLW KPNDRLSIRL LGSYENSDPR DSSLTSPSLG DRKRYSTIPD QYTSKTRIYN GTLDYQFDGA RLTSSSTYSI ADSLFNVDLA GTFNLAVPFY LYDGFKSKTF VQETRLASDP GGKVD
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