Gene Caul_3776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3776 
Symbol 
ID5901238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4092820 
End bp4093557 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID641564299 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001685401 
Protein GI167647738 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0883796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA AGGGCGTGTT CCTGGTGACG GGCGGCAGTC GAGGGATCGG CGAGGCCATC 
GCCCACGCGG CGGGGGCGGA GGGCTATCTC GTCCTGCTGA CCTATGTCGG CCGCGCCGAC
GCGGCGCAAA AGGTCGTCGA TGCGATCCGG GCGACTGGCG GGCGGGCCGA AGCGGTCCAG
GCCGACACCG GCAACCCCGC CGACGTGGCG CGCCTGTTCG CCGCCGCCGA CACCCATGGG
CGGCTTTCGG CCCTGGCCTA CAACGGCGGG ATCACCGGCG GGACGGGCCT GCTCGCCGAC
CAGTCGGACG AGACGCTGGC CAAGGTCATC GAGGTCAATC TGACGGGCGC CCTGCTCAGC
TGTCGTGAAG CGGTCAAGCG CATGTCGACC CGCCTGGGCG GGCAGGGCGG ATCGATCGTG
CTGCTGTCGT CACGCGCCGC CAACCTTGGC GCGCCGGCCC AGCATCTCTG GTACGCGGCG
TCGAAGGGCG GGATCGACAG CCTGAACATC GGCCTGTCCA AGGAGGTCGC GGGAGAAGGC
GTTCGGGTCA ATTGCGTATC GCCCGGCCCG ATCGCGACCG AGATCCACGC CCCTGGACGG
CTCGACGCGA TCCGTGACTC TCTGCCGATG CGGCGCGAAG GTAGGCCGGA AGAAGTCGCG
GCGGTCGTGA TGTTCCTGGT GTCGGACGCG GCCTCATACG TCGCCGGCGC CAATATCGAC
GTGGCCGGCG CGCGCTGA
 
Protein sequence
MTDKGVFLVT GGSRGIGEAI AHAAGAEGYL VLLTYVGRAD AAQKVVDAIR ATGGRAEAVQ 
ADTGNPADVA RLFAAADTHG RLSALAYNGG ITGGTGLLAD QSDETLAKVI EVNLTGALLS
CREAVKRMST RLGGQGGSIV LLSSRAANLG APAQHLWYAA SKGGIDSLNI GLSKEVAGEG
VRVNCVSPGP IATEIHAPGR LDAIRDSLPM RREGRPEEVA AVVMFLVSDA ASYVAGANID
VAGAR