Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3723 |
Symbol | |
ID | 5901179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4022942 |
End bp | 4023481 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641564234 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001685348 |
Protein GI | 167647685 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAACG GTGTCGTTAA GTGGTTCAAC CCGGCCAAGG GCTTCGGTTT CATTCAGCCC GAGGACGGCG GCCAGGACGT GTTCGTCCAC ATCGCCGCGG TTGAACGGTC GGGCCTGTCG GGCCTGAACG AAGGTGATCA AGTCACGTAT GAGATGGAAG AGGATCGCCG TTCGGGCAAG ACCTCGGCCG GCAATCTCCG CGTGACCGGC CAGGGCGCGG CCCCTTCGGC CCCCCGTCGT CCCGCCCCGC GCGGCTTCGA CGCCCCGCGT GGCGGCGGCT ATGACGCGCC CCGCGGCGGC GGTTACGGCG GCGGCGGCGG CGCTGGCGAA GCCGGCACCG GTGTGGTGAA GTGGTTCAAC AGCACCAAGG GCTTCGGCTT CATCCAGCCG GACAACGGCG GCGGCGACAT CTTCGTGCAC ATCTCGGCCG TCGAGCGCGC CGGCCTGCGC GGCCTGAATG AAGGCCAGCA AGTCGGTTAC GAACTGGAAC AGGACCGCCG CTCGGGCAAG ACCTCGGCCG GCAACCTGCG CATCCTCTAA
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Protein sequence | MANGVVKWFN PAKGFGFIQP EDGGQDVFVH IAAVERSGLS GLNEGDQVTY EMEEDRRSGK TSAGNLRVTG QGAAPSAPRR PAPRGFDAPR GGGYDAPRGG GYGGGGGAGE AGTGVVKWFN STKGFGFIQP DNGGGDIFVH ISAVERAGLR GLNEGQQVGY ELEQDRRSGK TSAGNLRIL
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