Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3250 |
Symbol | |
ID | 5900705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 3514359 |
End bp | 3515660 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641563755 |
Product | major facilitator transporter |
Protein accession | YP_001684875 |
Protein GI | 167647212 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.613026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGACAT TGCCCCCCGC TGGATCCGCC CAACAGGAAA GCACGCGCTA CCGATACGTC GTGGTGGTCT CCCTGGCCGT CGTCTACATG TTCAACTTCA TCGATCGGCA GCTGCTGTCG ATCCTTGCCG AACCGGTCAA ACGCGACCTG GGGCTCTCCG ACACTCAGCT GGGGATGTTG ACGGGACTGA TGTTCGCCCT GTTCTACACG GTGTTCGGCA TTCCCGTGGC GCTCCTGGCT GACCGCTGGC GTCGTGTCCG CTTGATCGCC CTGGCGTGCG GCCTTTGGAG CCTGTTCACC GCCTCCTCGG GCCTGGCGGT CAACTTCTTC ACCCTGGCGC TGGCTCGGGT CGGGGTGGGG ATCGGCGAGG CCGGCTGCTC GCCGCCGTCC TATGCGATCA TTTCCGACTA CTTCCCGCCC GAGCGTCGCG GTCGCGCCCT GGCGATCTAC GTGCTGGGCG TGCCGGCCGG CAGTTTCGTC GGCGCCCTGG CCGGCGGGTG GATCGCCGCC CACTATGGCT GGCGCGCCGC GTTCTTCGCC GTCGGGCTGG CTGGTCTCCT GATCACGCCC CTGATTCCGC TGGTCGTCCG CGAGCCGCGC AGGGGCCGCT ACGACCTCGA AGCCGCTCCG GTCGGCCCCG CCGCGACCTC CAGCGAAACC CTGTGGGGCG CCTTCGGTTT CTTCTGGCGT TCGCCGACGC TGGTGCTCAG CGCCCTGGCC TCTGGCGTGA CGGCCTTCGT CAGCTACGGA TTGATCAACT GGTCACCGGC CTTTCTGACC CGGGTCCAAG GGATGAACCT GAGCCAGGTC GCCGGCTATT TCGGTCTCTC CATTGCCGGC GCCATGGTCA TCGGCGCCTG GCTCGGCGGC CTGATCTCCG ACCGCGCCGG GGCCCGCAAT CCGATCTTCT ACGCCTTGTT GCCGGGTCTT GGCCTGCTGA GCATCACACC CTTCCTCTTC GCCTTCACCA CGGCCGCCAC CTGGCAGGCG TCGCTGGGCC TGCTTATCAT TCCGCTGATC GCTACCTCCA CCTACCTGGT GCCGGCCCTG GCGCTGCTGC AGAACCGCAC GCCGGCCCGC TATCGCGCGA CGACCAGTTC GATCCTGCTC TTCCTGATCA ACCTGACGGG ACTGGGGTGC GGCCCCTTGT TCGTCGGCGC CGTCAGCGAC GCCCTGCAAC CGCGCTATGG CGTGCACGCC CTGGGCCATG CGTTGCAGTG GCTGACGCCA TTCATCGTCC TGGCCTTCGG CCTGCAATGC GCCGCCGCCT GGACCCTTCG GCGCAAGGTC GCGGCGGTCT GA
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Protein sequence | MPTLPPAGSA QQESTRYRYV VVVSLAVVYM FNFIDRQLLS ILAEPVKRDL GLSDTQLGML TGLMFALFYT VFGIPVALLA DRWRRVRLIA LACGLWSLFT ASSGLAVNFF TLALARVGVG IGEAGCSPPS YAIISDYFPP ERRGRALAIY VLGVPAGSFV GALAGGWIAA HYGWRAAFFA VGLAGLLITP LIPLVVREPR RGRYDLEAAP VGPAATSSET LWGAFGFFWR SPTLVLSALA SGVTAFVSYG LINWSPAFLT RVQGMNLSQV AGYFGLSIAG AMVIGAWLGG LISDRAGARN PIFYALLPGL GLLSITPFLF AFTTAATWQA SLGLLIIPLI ATSTYLVPAL ALLQNRTPAR YRATTSSILL FLINLTGLGC GPLFVGAVSD ALQPRYGVHA LGHALQWLTP FIVLAFGLQC AAAWTLRRKV AAV
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