Gene Caul_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2979 
Symbol 
ID5900434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3236954 
End bp3237634 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content70% 
IMG OID641563476 
ProductABC transporter related 
Protein accessionYP_001684604 
Protein GI167646941 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.758866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCCC TCATCCAGGC CAGCGGCCTG ACCAGGGTCC TGGCCGATCC AGAGCCCTTC 
ACCCTGGTCG CCGACGCCGA CCTGACCATC GCGCCAGGCG AGCTCGTGGC GATCGTCGGA
CCGTCGGGAT GCGGCAAGTC CTCCCTGCTC TATCTGTTGG GTCTTCTCGA CCGTCCGACC
CGGGGCGAAC TGGCCATCGC GGGCTTGGCG ACGGACGGCC TGGACGACGC CGCGCGCACG
CGCCTGCGCC TGGAGCGCAT CGGCTACGTC TTTCAGTTTC ATTTCCTGCT GCCCGAACTG
ACGGCGCGGG CCAATGTCGC CCTGCCAATG CGCCGCCTCG GCCAGCGGTC GCGCGCCGAT
ATCGACGGGC GAGCGCAGGC CCTGCTGGAC AAACTGGGCG TGACGGCCGA GGCCGATCGG
CGCCCGGACC GCCTGTCGGG CGGTCAGCGC CAGCGCGTGG CGATCGCCCG CGCCTTGGCC
AACGATCCCG TGATCGTCCT GGGCGACGAG CCGACAGGCA ACCTCGACAG CGTCAACACC
CGGTTGGTGA TCGAGGAGTT CCAGCGCCTG GCTCACATCG AGGGGCGCGC CGTCGTCTGC
GTGACTCACG ATGCGGGTTT CGCCGAGGCC GCCGATCGCC GCATCCACAT GCTCGATGGG
CGCATCATCG CCGACAGCTA G
 
Protein sequence
MSPLIQASGL TRVLADPEPF TLVADADLTI APGELVAIVG PSGCGKSSLL YLLGLLDRPT 
RGELAIAGLA TDGLDDAART RLRLERIGYV FQFHFLLPEL TARANVALPM RRLGQRSRAD
IDGRAQALLD KLGVTAEADR RPDRLSGGQR QRVAIARALA NDPVIVLGDE PTGNLDSVNT
RLVIEEFQRL AHIEGRAVVC VTHDAGFAEA ADRRIHMLDG RIIADS