Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2979 |
Symbol | |
ID | 5900434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 3236954 |
End bp | 3237634 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641563476 |
Product | ABC transporter related |
Protein accession | YP_001684604 |
Protein GI | 167646941 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.758866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCCCCC TCATCCAGGC CAGCGGCCTG ACCAGGGTCC TGGCCGATCC AGAGCCCTTC ACCCTGGTCG CCGACGCCGA CCTGACCATC GCGCCAGGCG AGCTCGTGGC GATCGTCGGA CCGTCGGGAT GCGGCAAGTC CTCCCTGCTC TATCTGTTGG GTCTTCTCGA CCGTCCGACC CGGGGCGAAC TGGCCATCGC GGGCTTGGCG ACGGACGGCC TGGACGACGC CGCGCGCACG CGCCTGCGCC TGGAGCGCAT CGGCTACGTC TTTCAGTTTC ATTTCCTGCT GCCCGAACTG ACGGCGCGGG CCAATGTCGC CCTGCCAATG CGCCGCCTCG GCCAGCGGTC GCGCGCCGAT ATCGACGGGC GAGCGCAGGC CCTGCTGGAC AAACTGGGCG TGACGGCCGA GGCCGATCGG CGCCCGGACC GCCTGTCGGG CGGTCAGCGC CAGCGCGTGG CGATCGCCCG CGCCTTGGCC AACGATCCCG TGATCGTCCT GGGCGACGAG CCGACAGGCA ACCTCGACAG CGTCAACACC CGGTTGGTGA TCGAGGAGTT CCAGCGCCTG GCTCACATCG AGGGGCGCGC CGTCGTCTGC GTGACTCACG ATGCGGGTTT CGCCGAGGCC GCCGATCGCC GCATCCACAT GCTCGATGGG CGCATCATCG CCGACAGCTA G
|
Protein sequence | MSPLIQASGL TRVLADPEPF TLVADADLTI APGELVAIVG PSGCGKSSLL YLLGLLDRPT RGELAIAGLA TDGLDDAART RLRLERIGYV FQFHFLLPEL TARANVALPM RRLGQRSRAD IDGRAQALLD KLGVTAEADR RPDRLSGGQR QRVAIARALA NDPVIVLGDE PTGNLDSVNT RLVIEEFQRL AHIEGRAVVC VTHDAGFAEA ADRRIHMLDG RIIADS
|
| |