| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2937 |
|---|
| Symbol | |
|---|
| ID | 5900392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 3184661 |
|---|
| End bp | 3186796 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 711 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641563434 |
|---|
| Product | glucose-methanol-choline oxidoreductase |
|---|
| Protein accession | YP_001684562 |
|---|
| Protein GI | 167646899 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0446461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCG TGATCGGTGG CGGCGCCCGC TGGATGTATT GGCGGGCCAA CCGCAAGTTC
ATGGAACGGT TCAGCGAGGC GGTCGTCGGC TACAGGCCGG GCGGCGGCGG ACCGGACGGC
GTCCGGATCA TGGATTCGGT CTTCGCCTAC CTCGCGACCA TGCCGCCCAA CGCCTTCCAG
CAGGTGACCA TGGCCCTGGT CATGTGCCCG CTGAACGTTC CCGAGCGGTT GCCGCGCGGC
GATTTGGCGC GCCTGTTCGT CAAGATCTGG ATCGTCATCT CCAGCCACTT CGGGCGGATC
GGTTTTTCCC GGCTGACGGC CGACCAGGCG GGCCAGCGGC TGAACGTGCT GTTCGGGCGC
CTGACCGGGC AGATGCCCGA ACAGCAGGAC GACCTGGTCA AGACCGGCGT CATCCTGGGC
CAGCTGAAGT CGCTGATCAC CGCGGCCTAT TTCGAGCTCG ACGAGATCTG GAAGCAGATC
GGCTATTCGC CGTCGCCGCT GCCGCCCCGC GCGTGGCCGC CGCCCAGCGG CCCGGTCGAA
GGCGGGGTCA AGCGCTCGCC GGTCGGCGAG TTCCTGCACG CCAATGTCAG CACGCTGGCG
CAGGTGGCGC GCAAGCCCGC GGGTCGCAAG ACCTACTGCG TGATCGGCTC GGGGGCGGGC
GGGGCGATCG CCGCCATGAC CCTCGCCGAG ACCGACCCCG AGGCTCGCAT CCTGCTGCTG
GAATCCGGCC CTCTGGTCAC CAACGAAGGC TTTCCCGACA AGCTGCTCAA AGCCAGCGCC
GAGCTCTATA TGAACAACGG CGTCACCTTG ACCAAGGACA TGATGTACTC GTTCCGCCAG
GGCCGGTGCG TCGGCGGCTC GACGACGCTG AACAACAGCG TCGCCTTCAA GCCGGTGGGC
GTCTGGTGGG ACCAGAACAT CGTCGAGCGC TGGAAGGCCT GCGGCGCCGA CCTGAACTGG
CGTGAGCTGT CGAACTGCTA CGACGAGCTG AAGGACTTCC TCAATATCCA TCCGCTCGAG
GAGCGGGTGA TCACGCCCAT GGCCCACACC ATGGCCGAAG GCTTTCGCGG CATAGGCCAC
GAGGCGGTGA TCGTGCCCAG CAACACCCGG GACTGCATCG GTTGCGGTCG CTGCAACGCC
GGGTGCTCGT TCGACGCCAA GCAGTCCATG CTGATCACCG CCATCCCGGA ACTTCTGCGG
CGCGGCGGCC GGCTGGTGCC GGACGCCAAG GTCAAGAACA TCAACTATGT CCCGGACGGC
GACGGCTTCC GGGTCACGGG CCTGGAGGTG AAGGGACCCG ACGGCAAGAT GATCACCGTC
GAGGCCGACC GCGTGATCCT GGCCGCCGGC GCCTACGCCT CGTCCAAGCT GCTGTGGAAG
AGCGGCTTCA TCGGCCTGGA CCCCGGCGTG CGAACAGTCG GCAAACGCTT CGTCGGCAAT
ATGGGCACGC CCCTGGTCGG CAAGTTCCCA ACCCCACAGG GCGGCTGGAG CGGCCAGCAG
GTCGGTTTCG TGGTTGAACT TCCGGCCGAG CGGGTGGTGA TCGAGACCGC CTTCGCGCCC
CCGGCGGTGC TGGGCCTGCT GTCGTCACAG TGGGGCTCGG CGTTCCAGGG CCTGGTCAAG
GCGTTCGACC ACGTCGCCAT CGCCGTTCCG GTGCTGGCGG GCGAGACCTA TGGCGAGATC
CAGCGCGGCG CCTTGCCGAC CCTGTCCTGG GCCTTCGACT ATCGCCTCGG CGGCTTCGTG
ATCGACTACC ACATGGGCGA GGAGGACTGG ATCCGCATCG TGCGGGGCCT CAAGCTGACC
GCGCGCGCCA TGTTCCAGGC GGGCGCCGAG GAGGTGTTCA CCACCCGCTT CGACGGCCGG
ACGATCCGTT CGCCCGACGA GATCGACGGC CATTTCGACG GCATGGGACC GATCGATTGC
CTGCGGGTCG AAAGCGCCCA CATGCATGGC GGCAACGTCA TCCATCACGA CCCGGCCCGC
GGCGTGGTCG ACGCCGACTG CAAGGTCCAC GGCTTTCGCA ACCTGTGGAT CACCGACGGC
AGCGTGATCC CGGCGGCCAT CACCCTGAAC CTGCAATATA CGATCATGGC CGTCGCCCGC
TACGCGGCCA AGCGGATCGC CGTGGCGGTG GCTTGA
|
|---|
| Protein sequence | MARVIGGGAR WMYWRANRKF MERFSEAVVG YRPGGGGPDG VRIMDSVFAY LATMPPNAFQ
QVTMALVMCP LNVPERLPRG DLARLFVKIW IVISSHFGRI GFSRLTADQA GQRLNVLFGR
LTGQMPEQQD DLVKTGVILG QLKSLITAAY FELDEIWKQI GYSPSPLPPR AWPPPSGPVE
GGVKRSPVGE FLHANVSTLA QVARKPAGRK TYCVIGSGAG GAIAAMTLAE TDPEARILLL
ESGPLVTNEG FPDKLLKASA ELYMNNGVTL TKDMMYSFRQ GRCVGGSTTL NNSVAFKPVG
VWWDQNIVER WKACGADLNW RELSNCYDEL KDFLNIHPLE ERVITPMAHT MAEGFRGIGH
EAVIVPSNTR DCIGCGRCNA GCSFDAKQSM LITAIPELLR RGGRLVPDAK VKNINYVPDG
DGFRVTGLEV KGPDGKMITV EADRVILAAG AYASSKLLWK SGFIGLDPGV RTVGKRFVGN
MGTPLVGKFP TPQGGWSGQQ VGFVVELPAE RVVIETAFAP PAVLGLLSSQ WGSAFQGLVK
AFDHVAIAVP VLAGETYGEI QRGALPTLSW AFDYRLGGFV IDYHMGEEDW IRIVRGLKLT
ARAMFQAGAE EVFTTRFDGR TIRSPDEIDG HFDGMGPIDC LRVESAHMHG GNVIHHDPAR
GVVDADCKVH GFRNLWITDG SVIPAAITLN LQYTIMAVAR YAAKRIAVAV A
|
|---|
| |