Gene Caul_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2728 
Symbol 
ID5900183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2965360 
End bp2965857 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content66% 
IMG OID641563220 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001684353 
Protein GI167646690 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.122387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGC TGTACGGCGA GAAGCGGGCC AATCTCGTGC GTGTCTTCGC CGCCCGGCTG 
CGATCGGTCA GCGAAGCCGA AGACCTGATC CAGGACCTGT TCCTCAAGGT CGAGGCCGTG
GGCGAACTCG AGGTCGAGGG TGATGGTTCG GCGCTGCTGT TTCGGATGGC CAACAACCTG
ATGCTCGACC GGCTGCGCAG CCAGACCCGC GCCTGCGCCC GTGACGAGGG ATGGCGCAGC
CTGCAAGGCG TCGCCCTGGG AGACCAGCAG GTGGCCGACA TGCCCTCGCC CGAGGAGGTC
GTGGCCGGCC GACAGCGACT GAACGTGATG ATGGCGACGC TGGAAACCCT GCCGCCGCAG
GTGGCCCGGG CCTTCAAGCT GCACAAGCTG GAAGGGCTCA GCCACGCCGA GACCGCCGCG
GCCATGGGCG TCAGCCGCAG TTCGATCGAG AAACATGTGA GCGCCGCCTT GAAGGCGTTG
ACGGTAAAAC TTCCATGA
 
Protein sequence
MIRLYGEKRA NLVRVFAARL RSVSEAEDLI QDLFLKVEAV GELEVEGDGS ALLFRMANNL 
MLDRLRSQTR ACARDEGWRS LQGVALGDQQ VADMPSPEEV VAGRQRLNVM MATLETLPPQ
VARAFKLHKL EGLSHAETAA AMGVSRSSIE KHVSAALKAL TVKLP