Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2728 |
Symbol | |
ID | 5900183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 2965360 |
End bp | 2965857 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641563220 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001684353 |
Protein GI | 167646690 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.122387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGC TGTACGGCGA GAAGCGGGCC AATCTCGTGC GTGTCTTCGC CGCCCGGCTG CGATCGGTCA GCGAAGCCGA AGACCTGATC CAGGACCTGT TCCTCAAGGT CGAGGCCGTG GGCGAACTCG AGGTCGAGGG TGATGGTTCG GCGCTGCTGT TTCGGATGGC CAACAACCTG ATGCTCGACC GGCTGCGCAG CCAGACCCGC GCCTGCGCCC GTGACGAGGG ATGGCGCAGC CTGCAAGGCG TCGCCCTGGG AGACCAGCAG GTGGCCGACA TGCCCTCGCC CGAGGAGGTC GTGGCCGGCC GACAGCGACT GAACGTGATG ATGGCGACGC TGGAAACCCT GCCGCCGCAG GTGGCCCGGG CCTTCAAGCT GCACAAGCTG GAAGGGCTCA GCCACGCCGA GACCGCCGCG GCCATGGGCG TCAGCCGCAG TTCGATCGAG AAACATGTGA GCGCCGCCTT GAAGGCGTTG ACGGTAAAAC TTCCATGA
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Protein sequence | MIRLYGEKRA NLVRVFAARL RSVSEAEDLI QDLFLKVEAV GELEVEGDGS ALLFRMANNL MLDRLRSQTR ACARDEGWRS LQGVALGDQQ VADMPSPEEV VAGRQRLNVM MATLETLPPQ VARAFKLHKL EGLSHAETAA AMGVSRSSIE KHVSAALKAL TVKLP
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