Gene Caul_1935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1935 
Symbol 
ID5899390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2075109 
End bp2076674 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content68% 
IMG OID641562425 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001683562 
Protein GI167645899 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.790128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.638974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC GGTACGATGT CGCGATCGTC GGCGGCGGCC ATAATGGCCT GGTCGCAGGC 
GCCTATCTGG GCAAGGCCGG CAAGCGCGTG CTGGTCGTGG AGCGCGCCGC GATGGCCGGT
GGGTTGTCGC AATCGGACCA TGTAATCCCA GAAGCGCCCC ACCACATGGT CAACACCGGC
ACGGCCGAGC TGATCCATAT CCGCGCCTCT CCCGTCATGC AGGAGCTGGA CCTGCGTAGC
CACGGCTGGA AGACGGTCGA GACCGATCCG ATGTATGCCT ATCTCGATCC TGACGGCGGC
TCGATCGCGG TGTTCCGCGA TCCGCGCAGG ACAGCGGAAG ACATCGCCCG GTTCTCCAAG
ACCGATGCGA AGGCCTATCT CGAATTCATC GAGCTGATCG ATGGCTTGAT GCAGTTCGCC
GGCGCCATGG GCAAGGGCGA TCCGGGGGTG CGGACGGCCG GGAACTATCT GGATCTGGCC
AAGGTCGCGA TCCGCAACCG CGCGCTGAAG GACCGGCTGC AGCTGATCAG CACCGCCCCG
GCCGATCAGC TGGCTGCGGA GTGGTTCGAG CATCCGGCGA CGCAGGCCTT GCTGCTGGGC
GTCGTGGCCG GCGCCGGGCC GTTCGACACC GATGGCAATG GTATCGCCTA CGCTCTGTTT
GGCCTGCTGC ACCGGGTCGG GGTGTCCAAG GCCCTGGGCG GGATGCGGAT GTTCGCCGAC
GCCTTGCTGA GCGCCTACGC GGCCTCGGGC GGCCAACTGA TGCTGAACGC CGAGGTCGAG
GAGATCATCA TCCGCGACGG CGCCACACGC GGCGTGCGCC TGAAGGACGG TCGGATGATC
GAGGCCGGCC TCGTGATCGC GACTTGCGAC CCGATCACCG CCGCGCGGCT GGCGTCTCCG
GGCGGGCTGG ATCGCGTCAC CCGCACGCGG CTTGAATACG CCCCCGCGCA CCGGGCCAAT
GTGGGGCCGT CGCTGATCAA CGTGGCGTCG TCGAAATCCT TCCGCCTGAA GCGGCATCAG
GACCTGCGGA CCGACGGCGT CGACCTGAAC CAGGCGGTCG GGCTGATCGG CTCGGCGGAT
GAACTGAGGC AGGCGCTGGT CCATGCCCGG CGCGGACAGG TTCCGTCGGC GCCGGTCTTC
TCCCTGTCGC CGATGACCAA CTGGGATCCG TCGATGGCGC CCGAGGGCCA GGGCGTGGCC
TACATCTACC TGCCCGTCTT CCCGGTCGAG GTGAACGACG GATGGCCGCG CGCCAAGGCG
CCGGCGGCCG ACGCCATCAT CGCGCGGGCG GCGGACTATT ATGAGGGCTT CGACGGTGAA
CTGGGCCGCT GGTTCGAAAC CTGTCCGGAC CGGGAGGCGA GAACAGGCCT GACCAGGGGT
TGTGTCACCC ATGTCGATTT CGGCGCCCAG CGAACGGGCG CGAAGCGACC AGCCTTCGGG
CTTGGCGGGC CCGAGCCGCT GGCGCCGGGG TTCTTCCTGG GCGGCGCGGG GATCCATCCG
GGCGGCGGGG TTTCGGGTGG TCCGGGACGC CTGGTGTCGA AACGGGTGCT CGACTATCTG
GCCTGA
 
Protein sequence
MTERYDVAIV GGGHNGLVAG AYLGKAGKRV LVVERAAMAG GLSQSDHVIP EAPHHMVNTG 
TAELIHIRAS PVMQELDLRS HGWKTVETDP MYAYLDPDGG SIAVFRDPRR TAEDIARFSK
TDAKAYLEFI ELIDGLMQFA GAMGKGDPGV RTAGNYLDLA KVAIRNRALK DRLQLISTAP
ADQLAAEWFE HPATQALLLG VVAGAGPFDT DGNGIAYALF GLLHRVGVSK ALGGMRMFAD
ALLSAYAASG GQLMLNAEVE EIIIRDGATR GVRLKDGRMI EAGLVIATCD PITAARLASP
GGLDRVTRTR LEYAPAHRAN VGPSLINVAS SKSFRLKRHQ DLRTDGVDLN QAVGLIGSAD
ELRQALVHAR RGQVPSAPVF SLSPMTNWDP SMAPEGQGVA YIYLPVFPVE VNDGWPRAKA
PAADAIIARA ADYYEGFDGE LGRWFETCPD REARTGLTRG CVTHVDFGAQ RTGAKRPAFG
LGGPEPLAPG FFLGGAGIHP GGGVSGGPGR LVSKRVLDYL A