Gene Caul_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1490 
Symbol 
ID5898945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1583345 
End bp1584490 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content73% 
IMG OID641561977 
Productrod shape-determining protein MreC 
Protein accessionYP_001683118 
Protein GI167645455 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.116968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCTTTC GCGAAGGTCC GCTTGGCGAC CTGAAAGTGC CGCTTACCTG GACCGCGGCC 
GTGGCGTTGA TCGTCGCGGT CGTGATCGCG GTGGCGTTCC TGCTGGCCGA TCGGCGCGAA
ACCCTCCAGC AACAGGCCTA CGGCGTCACC CGCCAGACGG TCGACACGGT GTCCAAGCCG
GTCAGCGGCG TGATCGCGGC CCCGGGCCGC TGGACCGGGC TGGGGGTTGA TTTCGTCAGC
AGCTACTTCT TTACCGCGTC CGAGAACCGC CGGCTGAAGG CCGAGCTGAA GGAGATGCGC
GGCTATCGCG ACCGGTACCT GGCCGAGGTC GATAAGAACG ACAGCTACCG CTCGCTGCTG
GGCCTGCGCA CGGATCCGCC GATCCCGATG GTCGCCGCTC GGGTGGTCAG CGACACGCGC
GGACCCTTCG CCAATACTCG CCTGGCCGAC GCGGGCGCGG AAAAGGGCGT GGTGGTCGGC
AATCCGGTGA TGAACGAGCG CGGCCTGGTC GGCCGCGTGG TCGGCGTCGC CCATGGGGCC
AGCCGGGTGC TGCTGCTGAC CGACATCGCC TCGCGCACCC CGGTGATGAT CGACCGCACC
AACGCTCGCG CCATCCTGAC GGGCGACGGC GGTCCCAATC CCAAGCTGGA CTATCTGCGC
GGCGCCGATC CCATCAAGGA GGGCGACCGG GTCGTGACCT CGGGCGACGG CGGCGTGGTG
CCGCGCGGCC TGCCGGTGGG CGCGGCGGTC AAGGGCCTGG ACGGCCGCTG GCGGGTGGTG
CTGTTCGCCG ACGACGCCGC CATCGACTAT GTGCGCATCC TGCTGTTCAA GGACTTCGCG
CAGCTGGCGG ACCAGAAGGC CCTGCTGACC CGCAGCCTGC CGCCGGTGAC CACCGAGGAT
CCCGACGTCT CGATCCTGGG TCCCGCCGCC GGGGCGCCCA AGCCGCCGAC ACCGCCGCCG
ACCGGCGCGA CGACGCCGCC TGGCGCGGTC CCGTCGACGA CCCAGGCCAA GCCGCCCGCC
GCCGCCGCGC CGAAGCCGGC GACGCCTCCC AAGCCCGCGG CGCCAAGGCC AGCCGCGCCC
AAGACGCCGT CGCCGACGCC CGCCGCCCCG GCGACGGCCG GGGCTCAGCC TGGCGGAGGC
GTGTGA
 
Protein sequence
MPFREGPLGD LKVPLTWTAA VALIVAVVIA VAFLLADRRE TLQQQAYGVT RQTVDTVSKP 
VSGVIAAPGR WTGLGVDFVS SYFFTASENR RLKAELKEMR GYRDRYLAEV DKNDSYRSLL
GLRTDPPIPM VAARVVSDTR GPFANTRLAD AGAEKGVVVG NPVMNERGLV GRVVGVAHGA
SRVLLLTDIA SRTPVMIDRT NARAILTGDG GPNPKLDYLR GADPIKEGDR VVTSGDGGVV
PRGLPVGAAV KGLDGRWRVV LFADDAAIDY VRILLFKDFA QLADQKALLT RSLPPVTTED
PDVSILGPAA GAPKPPTPPP TGATTPPGAV PSTTQAKPPA AAAPKPATPP KPAAPRPAAP
KTPSPTPAAP ATAGAQPGGG V