Gene Caul_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1064 
Symbol 
ID5898519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1123862 
End bp1125025 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content71% 
IMG OID641561546 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001682692 
Protein GI167645029 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.43547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG ACGCGCAACT GCTGGCCGCC CAACCCGACA CCCTGAGGCC GGCCGCCCGG 
GGACGCCCCG AGGGGGCGAA GTTCGGCGAA GGCTTCGTCC TGGACACCTG GTACATGGCG
GCCCTGTCGC CCGACCTGAA GCCCGGCAAG ATGGAAGGCC GCGAGTTCCT CGGCGAGCCG
GTGCTGATCG GCCGCACCCG GGCCGGCGCC GTCTACGCCC TGCGCGACGT CTGCCCGCAC
CGCGCCGCCA AGCTGTCGGC CGGCAAGGTC CACGCCGAGG CCCCCAATGG CGAGAATCGC
GGCGAGAATG GCCGCCGCGA GACGGTCGAG TGCCCCTATC ATGGCTGGCG ATTCCACACC
GACGGCGCGT GCGCCAAGAT CCCGTCCCTG ACCGCCGCCG ACCCGCTCGA CGTCTCCAAG
GTGCGGGTCA AGACCTATCC GCTGGTCGAG AGCCAGGGCC TGGTGTGGAT CTGGATGTCG
GCCGACCCGC GCTTCGACGG CCAGCCGTCG GAACCGCCCC CGACAATCCC CGGCGTGGTC
GGCGGCAAGC CCAAGCTGGT CGACCACCTG GACTACGACA TCCATATCGA CCACGCGGTG
CTAGGCCTGA TCGACCCGGC CCACGGCCCG TTCGTGCACC ATCAGTGGTG GTGGCGCACC
ACCGCCAGCC AGCACGAGAA GCAGAAGCGG TTCGCCCCGT CCGAGGCCGG CTTCACCATG
GTGCGGCACG AGCCGTCCAA GAACTCCAAG GCCTACGCAA TCCTGGGCGG CGAGCCCCTG
ACCGAGATCA CCTTCCGCCT GCCCGGCCTG CGCTGGGAGC ATGTGAAGGT CGGCGACAGG
CAGGTGCTGG CCCTGTCGGC CATGACCCCG ATCAACGCCG GCAAGACCCG GATGAACCAG
ATCATCTGGT CCGACCACCC GGCCTTCACC GTCCTCTATC CGGTGATCCG CATGGCCGCC
CGCGCCTTCC TGCGCCAGGA CGGCCGGATC GTCGCGGCCC AGACCCGCGG CCTGCGGGAC
AACCCGGCCC TGATGTGGGT GGGCGACGCC GACCAGCAGG GCCGCTGGTA CCACCAGCTC
AAGCGCGAAT GGGCCGCCAG CCGCCGCGAA CGCCGGCCGT TCAGGAACCC GGTCGAGGCC
GCGACGCTGC GGTGGCGGAC CTAG
 
Protein sequence
MADDAQLLAA QPDTLRPAAR GRPEGAKFGE GFVLDTWYMA ALSPDLKPGK MEGREFLGEP 
VLIGRTRAGA VYALRDVCPH RAAKLSAGKV HAEAPNGENR GENGRRETVE CPYHGWRFHT
DGACAKIPSL TAADPLDVSK VRVKTYPLVE SQGLVWIWMS ADPRFDGQPS EPPPTIPGVV
GGKPKLVDHL DYDIHIDHAV LGLIDPAHGP FVHHQWWWRT TASQHEKQKR FAPSEAGFTM
VRHEPSKNSK AYAILGGEPL TEITFRLPGL RWEHVKVGDR QVLALSAMTP INAGKTRMNQ
IIWSDHPAFT VLYPVIRMAA RAFLRQDGRI VAAQTRGLRD NPALMWVGDA DQQGRWYHQL
KREWAASRRE RRPFRNPVEA ATLRWRT