Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0861 |
Symbol | |
ID | 5898316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 914923 |
End bp | 916755 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641561343 |
Product | GTP-binding protein TypA |
Protein accession | YP_001682490 |
Protein GI | 167644827 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.184332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCATGC GAAACATCGC CATCATCGCG CACGTCGATC ATGGCAAGAC CACGCTCGTC GATCAGCTCC TGGCCCAGTC GGGCGTGTTC CGCGCCAACG AGGCGCAAAC AGAGCGCGCC ATGGACTCCA ATGACCAGGA GCGCGAACGC GGGATCACCA TCCTGGCCAA GTGCACCAGC GTCCTGTGGC ATGGCGAAGC GGGCGAAACC CGCATCAACA TCATCGACAC CCCCGGCCAC GCCGACTTCG GCGGCGAAGT CGAACGCATC CTGGGCATGG TCGATGGCTG CGTGATCCTG GTCGACGCCG AGGAAGGCGT CATGCCCCAG ACCAAGTTCG TGCTGGGCAA GGCCCTGAAG ATGGGCCTGC GCCCGATCCT CTGCCTCAAC AAGGTGGACC GCCCGCACGC CGACCCGGAC CGCATCCTCA ACGACGTGTT CGACCTGTTC GCCACCATGG GCGCCACGGA CGAGCAGCTG GACTTCCCGC ACATCTATGC GTCGGGCAAG AACGGTTGGG CGACCCTGGA CATGGCCAAG CCCAACGACA CCCTGGCGCC GCTGTTCGAC CTGATCGTCC GCCACGTTCC GGAACCCAAG GTCGCCGTCA ACAAGGACAA GCCGTTCCAG ATGCTGGGCG TGCTGATCGA AAACGACCCC TTCCTGGGTC GCCTGCTGAC CGGCCGCATC GAATCCGGCA AGGCCGTTCC CGGCATGTCG ATCCACGCCC TGTCGCTGGA CGGCAAGGAA ATCGAACGCG GCCGCATCAC CAAGGTGCTG GCTTTCCGCG GCCTGAAGCG CCAACCGATC GATGACGCCG AAGCCGGCGA CATCATCGCC ATCGCGGGCC TGTCCAAGGC GACCGTGGCC GACACCCTGT GCGCCATGGA CGTCACCACC GCCCTGCCCG CCCAGCCGAT CGATCCGCCG ACCATCTCGA TGACCGTCTC GGTCAACGAC AGCCCGCTGG CCGGCAAGGA AGGCGACAAG GTCCAAAGCC GCGTCATTCG CGACCGCCTG CTGAAGGAAG CCGAATCGAA CGTGGCCATC AAGGTCACCG AAACGGCCGA GAAGGACGCC TATGAAGTCG CCGGCCGCGG CGAACTGCAG CTGGGCGTGC TGATCGAAGG CATGCGCCGC GAAGGCTTCG AGGTGTCGAT CAGCCGTCCG CGCGTGGTGT TCCAGACCGA TCCGGAAACC GGCAAGCGCC TGGAGCCGAT CGAGGACGTC ATGATCGACG TCGACGACGA GTTCTCGGGC GTCGTCATCG AGAAGCTGTC GGCTCGCAAG GCCGAGCTGA AGGACATGGG TCCGTCGGGC GCCGGCAAGA CCCGCATCCA GCTGACCGCC CCGTCGCGTT CGCTGATCGG CTATCAGGGC GAGTTCCTGA CCGACACCCG CGGTTCGGGC GTGCTGAACC GCGTGTTCAG CCACTACGAG CCGTACAAGG GCGCCATCGA CTCGGCGCGC AAGGGCGTGC TGGTCAGCAA CTCGGACGGC GAAACCGCGG CCTTCGCGCT GTGGAACCTG GAAGATCGCG GCGTCATGTT CGTCGGCGCC GGCGAGAAGA CCTACCAGGG CATGATCATC GGCGAGAACG CCCGTGGTGA TGACATGGAC GTCAACCCGA TGAAGGCCAA GCAGCTGAAC AACATCCGCG CCTCGGGCAA GGATGAAGCC ATCCGCCTGA CCCCGCCGCG TCGCATGACC CTCGAACAGG CCATCGCCTA CATCGAGGAA GACGAGCTGG TGGAAGTGAC GCCCAAGAAC ATCCGCCTGC GCAAGCAGAC CCTGAACCCG TCGTTCCGCA AGCGTCGCGT CAAGGAAGAA TAG
|
Protein sequence | MSMRNIAIIA HVDHGKTTLV DQLLAQSGVF RANEAQTERA MDSNDQERER GITILAKCTS VLWHGEAGET RINIIDTPGH ADFGGEVERI LGMVDGCVIL VDAEEGVMPQ TKFVLGKALK MGLRPILCLN KVDRPHADPD RILNDVFDLF ATMGATDEQL DFPHIYASGK NGWATLDMAK PNDTLAPLFD LIVRHVPEPK VAVNKDKPFQ MLGVLIENDP FLGRLLTGRI ESGKAVPGMS IHALSLDGKE IERGRITKVL AFRGLKRQPI DDAEAGDIIA IAGLSKATVA DTLCAMDVTT ALPAQPIDPP TISMTVSVND SPLAGKEGDK VQSRVIRDRL LKEAESNVAI KVTETAEKDA YEVAGRGELQ LGVLIEGMRR EGFEVSISRP RVVFQTDPET GKRLEPIEDV MIDVDDEFSG VVIEKLSARK AELKDMGPSG AGKTRIQLTA PSRSLIGYQG EFLTDTRGSG VLNRVFSHYE PYKGAIDSAR KGVLVSNSDG ETAAFALWNL EDRGVMFVGA GEKTYQGMII GENARGDDMD VNPMKAKQLN NIRASGKDEA IRLTPPRRMT LEQAIAYIEE DELVEVTPKN IRLRKQTLNP SFRKRRVKEE
|
| |