Gene Caul_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0788 
Symbol 
ID5898243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp833646 
End bp835013 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content69% 
IMG OID641561269 
Producthistidine triad (HIT) protein 
Protein accessionYP_001682417 
Protein GI167644754 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.864692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.369294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCC AGATCGCCGC CGGCCTCGCC GCCCTGATGC TCCTTGGTCT CGCCGCGTCC 
GGCCAGACCG AGCCGCGTTT CGCCCCGATC CCCAAGGCGG TCGTGGCGGA CCCGGTCCGC
GACGCCGCCC ATCCGGCCGA CATGGCCGCC TTCACGCTTC CCACCGGCGG CGTGCGGGTC
AATGCGCTGA TGTACATCGC CTCGGGCGAC CAGCCGCATC CGACGATGCT GTTCCTGCAC
GGCTTTCCTG GCAACGAGAC CAATATCGAC CTGATGCAGG CGGTGCGCCG GGCCGGCTGG
AACGTGTTGA AGATCAACTA TCGCGGCTCG TGGGGCAGTC CGGGCAAGTT CTCGTTCGCG
GGCGCCCGCG CCGACGGCGA GGCGGCTGTG GCCTTCCTGT TCGATCCGGC CAACATCGCC
AAGTATCACA TCGACCCCAA GCGAATCGTG GTGGCCGGCC ACAGCATGGG CGGTTTCATG
GCCGCCGACG CCGCGGCCGC CGAGCCCCGC CTGGCCGGAA CGGTGCTGAT CGACGCCTGG
GACATCGGCA AGAACGCGGC CCAGATCACC AGCCCGGCCA CGCGCAAGGC GGCCGCCGAC
AAGATGCGAC CCGACACCCG GCCCCTGGCC GGGACCAGCG CCGAATTGCT GGTCAAGGAG
ATCGAGACGA ACGCCGCCAA GCTGGACCTC GAGGCGCTGA GCGCCCGGAT CGCCAACCGC
CCTCTGTTGA TGGTTGGCGC CGAGCACGCC CGGGCGCCCA CGATCCGCAA GCTGGCCGCC
GCGGCCCGTC AGGCCCAGGC CACGGCCCTG ACCGAAACCT ACATGGACAC CGACCACGGC
TTCTCGGACC ATCGCATCGC GCTGGAGGCC GAGGTGGTCC GCTGGCTGGG CCAATTCGAT
CCGGCCTCGG CCAAGCCCGG CACGCCGCGG ATCCCCCTGA AGGCGCCCTA TGACGAGGCC
AACCCGTTCG CCAGGATCCT GCGCGGCGAG ATCGCCGTGC CCAAGGTCTA TGAGGACGAC
CAGGTGCTGG CCTTCATGGA CTACGCCCCG GCCGAGCCGG GCCACGTGCT GGTGATCTCC
AAGACCTCCA AGGCCCGCAA CCTCCTGGAG ATCTCGCCCC AGGACCTGTC GCGGATCATG
GCCGTGGCCG CCCGGGTCGG CCAGGCCCAG GTCGATGGCC TCGGGGTCGA GGGTTTCACC
ATCGTCCAGA ACAACGGCGT CGGCCAAAGC GTGCCGCACC TGCACATCCA CGTCATCCCA
CGCGTGGCCG GCAAGCCGCT GATGTTCGTC GAGAACGAGA AGGGCGACCC CAAGGACATC
GCGGCCATGG CCGACAAGAT CCGGTCGGCG ATGAAAGCTC CCCAATAG
 
Protein sequence
MKRQIAAGLA ALMLLGLAAS GQTEPRFAPI PKAVVADPVR DAAHPADMAA FTLPTGGVRV 
NALMYIASGD QPHPTMLFLH GFPGNETNID LMQAVRRAGW NVLKINYRGS WGSPGKFSFA
GARADGEAAV AFLFDPANIA KYHIDPKRIV VAGHSMGGFM AADAAAAEPR LAGTVLIDAW
DIGKNAAQIT SPATRKAAAD KMRPDTRPLA GTSAELLVKE IETNAAKLDL EALSARIANR
PLLMVGAEHA RAPTIRKLAA AARQAQATAL TETYMDTDHG FSDHRIALEA EVVRWLGQFD
PASAKPGTPR IPLKAPYDEA NPFARILRGE IAVPKVYEDD QVLAFMDYAP AEPGHVLVIS
KTSKARNLLE ISPQDLSRIM AVAARVGQAQ VDGLGVEGFT IVQNNGVGQS VPHLHIHVIP
RVAGKPLMFV ENEKGDPKDI AAMADKIRSA MKAPQ