| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0141 |
|---|
| Symbol | |
|---|
| ID | 5897853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 155553 |
|---|
| End bp | 155999 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641560626 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001681777 |
|---|
| Protein GI | 167644114 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.239083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTCT TCATGCGTCG CGCCGCCAGC CACGGCGACG CCGAGGACAT GACCCAGGAG
CTGTTCGCCA AGCTGGCCAC CAGCCACACC GGTCCGATGG ACAACGCCGA CGCCTACATC
TTCCAGATGG CCGCCAACCT GCTGCGCGAC CGGGGTCGGC GCGAGCGGGT GCGGGCCAAT
TTCCGGGCCA GCGTGCATGC GGGAGCCGGC GATCTGGAGT CGCTGGATCC GGCCCGGGTG
CTGCTGGCGC GCGAGAGCCT GGGCGAGGTG TCCGACGCCC TGCGCGAATT GCCCGAACGC
ACGCGGGCCA TCTTTCTTCT GTTCCGTCTG GAAGGCATGA AGCAATCCGA ACTCGCCGCG
CTTTACGGCG TCTCCGTCAG CGCGGTGCAA AAGCACATCT TCAAGGCCAT GACCCATTTG
ACCCGACGCG TGAGGGCCGG CGAATGA
|
|---|
| Protein sequence | MAFFMRRAAS HGDAEDMTQE LFAKLATSHT GPMDNADAYI FQMAANLLRD RGRRERVRAN
FRASVHAGAG DLESLDPARV LLARESLGEV SDALRELPER TRAIFLLFRL EGMKQSELAA
LYGVSVSAVQ KHIFKAMTHL TRRVRAGE
|
|---|
| |