Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0042 |
Symbol | |
ID | 5897754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 51024 |
End bp | 51743 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641560525 |
Product | ribonuclease T2 |
Protein accession | YP_001681678 |
Protein GI | 167644015 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG3719] Ribonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.389135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.181454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCCT TGAAGATCAC CCAGGCCCTG GCCACCGCCC TCGCCGCCCT GGCCCTGGCC GGCGCCGCCC AGGCCTCCAG CCTCAAATCC TGCGCGATCC CCAGGGACGT CGTCCCCGTC GCCCCCGAGA TCCCGCCCGC CGACCAGATC CACACCGACA TCCCGACCGC CGCCCACCTG CTGGCCCTGT TCTGGTCGCC CGAGGCTTGC CGCGCCGGGA TCCCGGAGTC GGACAGGAAG ATCCAGTGCG AGGCCAACAG CTTCGGCTTC ACCGTCCACG GCCTGTGGCC CAACGGCCCC GACAAGGTCC ATCCGCGCTA CTGCCGCCCG AGCCCGTCGC TGAGCGTCGC CACGGTGAAG GCCAACCTGT GCATGACCCC CTCGCCCTGG CTGCTGCAAC ACGAGTGGCA GGCGCACGGG ACCTGCGGCT GGGACACGCC CGAGGCCTAT TTCGCCAAGG AACGGGCGGT GCGCGCGGGT TTGAGCGTAC CGGAGCTGAA GCCTGGCCCC AGCGGGACGA TGACGGCCGG TGAAGTGCGG GCCGCTTTCC TCAAGCGCAA TCGCGGCATG ACCGCCGAGG GACTGAACGT GCGGGTCAAC AAGGACAACC GCCTGACCGA GGTGTGGGTC TGCCTGGACC TGAAGTTCAA GCTGGCGGCC TGTCGGGGCG GGAATGGGAC GCCGGACGGG GTGACGATCC GGGTGACGCC GAAGGGGTGA
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Protein sequence | MPSLKITQAL ATALAALALA GAAQASSLKS CAIPRDVVPV APEIPPADQI HTDIPTAAHL LALFWSPEAC RAGIPESDRK IQCEANSFGF TVHGLWPNGP DKVHPRYCRP SPSLSVATVK ANLCMTPSPW LLQHEWQAHG TCGWDTPEAY FAKERAVRAG LSVPELKPGP SGTMTAGEVR AAFLKRNRGM TAEGLNVRVN KDNRLTEVWV CLDLKFKLAA CRGGNGTPDG VTIRVTPKG
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