Gene Caul_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0042 
Symbol 
ID5897754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp51024 
End bp51743 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content70% 
IMG OID641560525 
Productribonuclease T2 
Protein accessionYP_001681678 
Protein GI167644015 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3719] Ribonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.389135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.181454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCCT TGAAGATCAC CCAGGCCCTG GCCACCGCCC TCGCCGCCCT GGCCCTGGCC 
GGCGCCGCCC AGGCCTCCAG CCTCAAATCC TGCGCGATCC CCAGGGACGT CGTCCCCGTC
GCCCCCGAGA TCCCGCCCGC CGACCAGATC CACACCGACA TCCCGACCGC CGCCCACCTG
CTGGCCCTGT TCTGGTCGCC CGAGGCTTGC CGCGCCGGGA TCCCGGAGTC GGACAGGAAG
ATCCAGTGCG AGGCCAACAG CTTCGGCTTC ACCGTCCACG GCCTGTGGCC CAACGGCCCC
GACAAGGTCC ATCCGCGCTA CTGCCGCCCG AGCCCGTCGC TGAGCGTCGC CACGGTGAAG
GCCAACCTGT GCATGACCCC CTCGCCCTGG CTGCTGCAAC ACGAGTGGCA GGCGCACGGG
ACCTGCGGCT GGGACACGCC CGAGGCCTAT TTCGCCAAGG AACGGGCGGT GCGCGCGGGT
TTGAGCGTAC CGGAGCTGAA GCCTGGCCCC AGCGGGACGA TGACGGCCGG TGAAGTGCGG
GCCGCTTTCC TCAAGCGCAA TCGCGGCATG ACCGCCGAGG GACTGAACGT GCGGGTCAAC
AAGGACAACC GCCTGACCGA GGTGTGGGTC TGCCTGGACC TGAAGTTCAA GCTGGCGGCC
TGTCGGGGCG GGAATGGGAC GCCGGACGGG GTGACGATCC GGGTGACGCC GAAGGGGTGA
 
Protein sequence
MPSLKITQAL ATALAALALA GAAQASSLKS CAIPRDVVPV APEIPPADQI HTDIPTAAHL 
LALFWSPEAC RAGIPESDRK IQCEANSFGF TVHGLWPNGP DKVHPRYCRP SPSLSVATVK
ANLCMTPSPW LLQHEWQAHG TCGWDTPEAY FAKERAVRAG LSVPELKPGP SGTMTAGEVR
AAFLKRNRGM TAEGLNVRVN KDNRLTEVWV CLDLKFKLAA CRGGNGTPDG VTIRVTPKG