Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3602 |
Symbol | |
ID | 7269746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 4377807 |
End bp | 4379060 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643568410 |
Product | 3-isopropylmalate dehydratase large subunit |
Protein accession | YP_002464876 |
Protein GI | 219850443 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein [TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.187655 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACGA TGAGCGAGCA AATCTTAAGC CGTGTTGCCG GACGAATGGT GCGCGCCGGC GATGTTGTGA CGGCAAATGT TGATCTGGTG ATGGTACACG ATAGCCTGGC GCCCGGTATT ATCCGTATTC TCCACAACGA ACTGGGTGCC GAACGGGTGT GGGATCCTCA GCGCATTGCG GTTGTGATCG ATCACGTCGC CCCGGCTGCC AGTGTACAGA CCGCAGAAAA GCAGCAAGAA GTGCGGCGTT GGGTCAAGGC GCAAGGTATT CCCAACTTGT TCGATGTCGG GCGCGGTATT TCGCACCCGG TGTTGGTGGA AGAGGGGTTG GCCCAGCCGG GTATGTTGAT TTTGGGTAGC GATAGCCACA GTACGGCGTA TGGCTGTGTC GGAGCGTTTG GCACCGGCAT GGGCAGCACC GACATCGCAC TCGCATTGGC TACGGGTAAG ACGTGGTTGC GCGTGCCGGA GACCACCGTG GTGCGAGCAC GCGGTGAGTT TGGGTTTGGT GTGGGGCCGA AAGATTTGGC ACTCCGCGCT GCCCGTCTGC TTCGCGCCGA TGGAGCAACA TATGCAGCCA TCGAGTGGCA CGGCGTCGAG CACCTGAGCG TGATGGAGCG GATGACGCTG GCGACCCTCT CGATTGAAAT GGGGGCCAAG GCTGGGATTA TTCCGCCGAC CGGCCTCGAT CTCACCGGCC CACTCGTACC GACCGTCGAT GCCGACGCGC AGTATCAACA GGTGGTTGAG ATCGATCTTG AGCAACTGGA GCCACAAGTC TCGGCACCAC ACTATGTTGA CAACGTTGCG AACCTCAGTG ATCTGGGGCG CGTCGCAGTT GATGTGGTCT ATCTCGGCAC ATGCACGAAC GGCCATTACG AAGATATGGC AGTGGCAGCC CAGATTCTGG CCGGACGACG TATCGCTCCC GGTGTGCGGA TGATCGTTGT GCCGGCTAGC GCGCAGGCGC TGCATCGCGC CGCCGCCGAT GGCACCCTCG CAACCTTGCT CGCCGCCGGC GCGACCATCG GCACGCCGGG GTGCGGCGCC TGCATTGGCC GCCACATGGG AGTGCTCGCC CCCGGTGAGG TCTGTCTGTT CACCGGTAAT CGCAATTTCC GTGGCCGTAT GGGCAGCCCT GAAGCGCAGA TCTATTTGGC TTCGCCGGCA GTGGCTGCCG CGACGGCCCT CACCGGTTAT CTGACCGACC CGCGGATGGT GATGGATGGG CAGCCGGTTG GCTCACATTC GTGA
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Protein sequence | MPTMSEQILS RVAGRMVRAG DVVTANVDLV MVHDSLAPGI IRILHNELGA ERVWDPQRIA VVIDHVAPAA SVQTAEKQQE VRRWVKAQGI PNLFDVGRGI SHPVLVEEGL AQPGMLILGS DSHSTAYGCV GAFGTGMGST DIALALATGK TWLRVPETTV VRARGEFGFG VGPKDLALRA ARLLRADGAT YAAIEWHGVE HLSVMERMTL ATLSIEMGAK AGIIPPTGLD LTGPLVPTVD ADAQYQQVVE IDLEQLEPQV SAPHYVDNVA NLSDLGRVAV DVVYLGTCTN GHYEDMAVAA QILAGRRIAP GVRMIVVPAS AQALHRAAAD GTLATLLAAG ATIGTPGCGA CIGRHMGVLA PGEVCLFTGN RNFRGRMGSP EAQIYLASPA VAAATALTGY LTDPRMVMDG QPVGSHS
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