Gene Cagg_3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3231 
Symbol 
ID7267378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3916718 
End bp3917791 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content51% 
IMG OID643568052 
Producthypothetical protein 
Protein accessionYP_002464525 
Protein GI219850092 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0411877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAT CTATTCGCCG GCCATTGCTT AATCCGATCT TGGTACGTGA AGCCCGCACA 
CGGATGCGTG GGTTTCGTCC GTACCTGATT TTGACTGTCT TCTTGTTACT GCTCTTCATG
ACTGCATTGG GCATCTATCA ATACATGATG TTGCAGGTGC GAACTGGTAC AGTAGTGTTA
AGTTCGCACG TTGGGCAAGC CTTGTTTCGT GGTCTGGCTT TCACCGAGAT GCTCTTCATC
ATCCTCGTTG CACCGATTTT GACCAGTGGT GCTATTAGCA GTGAGCGCGA GCGTTTGACC
TACGATATGC TGCTGGCAAC ACCCTTGCAA CCGGGGCAGA TGCTCTCGGG GAAGTTAGTC
GGTGCGTTAA GTTACCTCTT GCTCTTGATT ATAGCGTCGA TCCCGGTCTT TAGTACGGTG
TTGATGTTTG GTGGGGTCGA TCTTCGCACA CTGATATGGA TTATCTTACT ATTAAGTAGT
GCTGCACTCT TCTTTGGCAC TATCGGCTTA TGCTGTTCGG CATTATGTAA GCGCACGACA
TCGGCCACGA TTGCAAGCTA TGCGGTTGTG GTTCTGTTAT GTGGAGTTCC GTTGCTGATT
GCGACGATTT GGCCGCAATT TAGTAATCCG ATGGGGCAAA GCCCACCGCC GTGGTTGCTG
TATCTCAACC CACTCAGTGC GATTGTGGCC GTAACGACAG TTGTTCCAGC CGTCAACAAT
CCTAAGATCC CATTTTTTAG CGTCAGCGAT CCGTTTATGG TTGTGCCGTT TCTGTCGCAA
TTTAGTGTTG GCGTCGTGCG CTATACAGAT ACAGGTCCGG TGTTGATGCC GGTCTATCGG
GCGACATTGT TAGGGTACTG GTTAGGGACA TTTGTGTTGC TCTGGCTGAG TTCGCATCTG
GCCCTGCCGG TACGACGTTG GCGACCGCGC TGGAGCGATT TAGGGTTTGT AGCAATAGTG
GGTGCGATTG CACTATTAAT GTGGGTGAGG ATTGAATGGT GGTGGGTTGT ACCACCGCCT
GATCCATGGT TGGTACCAGG CGAACCGGTA CCGATGCCGG GAGCGTTGCC GTAA
 
Protein sequence
MATSIRRPLL NPILVREART RMRGFRPYLI LTVFLLLLFM TALGIYQYMM LQVRTGTVVL 
SSHVGQALFR GLAFTEMLFI ILVAPILTSG AISSERERLT YDMLLATPLQ PGQMLSGKLV
GALSYLLLLI IASIPVFSTV LMFGGVDLRT LIWIILLLSS AALFFGTIGL CCSALCKRTT
SATIASYAVV VLLCGVPLLI ATIWPQFSNP MGQSPPPWLL YLNPLSAIVA VTTVVPAVNN
PKIPFFSVSD PFMVVPFLSQ FSVGVVRYTD TGPVLMPVYR ATLLGYWLGT FVLLWLSSHL
ALPVRRWRPR WSDLGFVAIV GAIALLMWVR IEWWWVVPPP DPWLVPGEPV PMPGALP