| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3225 |
|---|
| Symbol | |
|---|
| ID | 7267372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 3909258 |
|---|
| End bp | 3910811 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643568046 |
|---|
| Product | integral membrane protein MviN |
|---|
| Protein accession | YP_002464519 |
|---|
| Protein GI | 219850086 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
|---|
| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.104496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.394976 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGAAA CCTCCTCCTC CACCGGTAGC ATCTTTCGCA GTATCGCGCT GGCGGCATTA
CTCATTAGTC TGGGTAATAT CGCCAGCCGT GTGCTGGGAT TGATTCGGGA ACCGATCATT
GCCGCTTACT TTAGTCGTGG GTTGGCCGTC GATGCGTTTA CGCTCGCGTG GACGCTCCCC
AACGCATTGT ACGAGCTGCT GATTAGTGGC GCAGTAAGTG CAGCATTGGT ACCGGTCTTT
AGTGAATATG CCGAACGTGA TCGCACTGAA TTTTGGTACG TTGTCTCAAC GGTGATCACA
TTGGCTTTTA CTACGCTGGT CATTGCCGGC GCGCTGCTGG CCTGGCAAGC ACCACTCGCC
ATTGCCCTGC TTTCACGCCC CACCGAATCT GCGTTGCAAG CCGAAGCGAT TGCACTCGTC
GGTTGGCTCT TGCCGGCCGT CACGCTGATG GGTATTTCCG GCATCGTGAC GGCAGTTTTA
CACGCACAAC GTCGCTTCCT ATTACCGGCT TTTGTCGCTG CTGCTTTTAA CGCCGGCATG
ATCGTAGGAG TCATCGTTTT TGCTCCCTAC ATCGGCATCA AGAGTCTTGC CGCCGGGACT
CTACTCGGCG CCTGCGCCCA ACTGGCGATC CAGTTGCCGG GATTACGCGA TGCCCAATTC
CGCCCCCGGT TTGATATACA CCACCCGGCG GTACGTCGTA TCTTGCGCCT CTACGCCCCT
GTCACCTTGG GAATCGGTTT CTCGCTGATC GGTGTCACCA TTGACCGTTG GTTGGCCTCC
GGCTTTCCGG CTGCCCTGTC GACAATGCGC TTCGCAACGA CACTGATCCA GTTCCCATTG
GGTCTCGTCG CCTCGGCAGT TGCACTCGCC GTACTGCCAA CCCTCTCCCG CCAAAGCGCT
ACCGGTGATG AAGCGGCGTT CCGATCCACC CTGGCAATGG GCCTCAAAAT AGTGCTCTTG
CTCATTTTAC CGGCAACAGC CGGTTTGGCA GCGCTAAGCT TACCGATCAC AGCGACCCTT
TTCGAGCGAG GCGCATTTGG CGCCGAGGAT ACTGCGATTA CGGCATTGGC GCTGCTCTAC
TATTTACCAG GCTTACCGGC AGCAGCCATC GACCAAATAC TGCTGTTTGC TTTCTATGCG
CGCAAAAATA CACTGACACC CAACCTGATT CAGGGTGCAG CCATTCTGTG TTATGTCGCC
GTAGCTATTC CATTGGCCGA ATGGACATCA CTAGGCTTTT TGGGCTTAGT CTTGGGAAAT
TCAGCGCAGT GGATCGGTCA TGCGATCATC ACCGCCTGGC TTTTGCAACG CTCGCTACCG
CTGAACGGCT TACGCCTCGG CGAGGCAATG CTGAAAGGAT TGCTGGCAAG TGCGCTGATG
GCCTTAGCGG TCAGCGGTAT CGTAGCCTTC GGGCGTAGTT GGCCGCCGCT CGTGCAGGTG
GTGGTGGCCG GAAGTATCGG TGTCGCCCTC TACACCTTAC TCGCCATCGT CCTGCGTCTC
GAAGCGGCGA CCTTTTTGGC AAACGTGATC CGAATGCGTT TACGGCGGGT GTAA
|
|---|
| Protein sequence | MTETSSSTGS IFRSIALAAL LISLGNIASR VLGLIREPII AAYFSRGLAV DAFTLAWTLP
NALYELLISG AVSAALVPVF SEYAERDRTE FWYVVSTVIT LAFTTLVIAG ALLAWQAPLA
IALLSRPTES ALQAEAIALV GWLLPAVTLM GISGIVTAVL HAQRRFLLPA FVAAAFNAGM
IVGVIVFAPY IGIKSLAAGT LLGACAQLAI QLPGLRDAQF RPRFDIHHPA VRRILRLYAP
VTLGIGFSLI GVTIDRWLAS GFPAALSTMR FATTLIQFPL GLVASAVALA VLPTLSRQSA
TGDEAAFRST LAMGLKIVLL LILPATAGLA ALSLPITATL FERGAFGAED TAITALALLY
YLPGLPAAAI DQILLFAFYA RKNTLTPNLI QGAAILCYVA VAIPLAEWTS LGFLGLVLGN
SAQWIGHAII TAWLLQRSLP LNGLRLGEAM LKGLLASALM ALAVSGIVAF GRSWPPLVQV
VVAGSIGVAL YTLLAIVLRL EAATFLANVI RMRLRRV
|
|---|
| |