Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3024 |
Symbol | rplC |
ID | 7266555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3680469 |
End bp | 3681101 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643567846 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_002464320 |
Protein GI | 219849887 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.371217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00790921 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTCACG GATTGTTAGG TCGTAAAATC GGGATGATGC AGTACTTCAC CAAGGAAGGG AGGGCTATCC CGGTAACGGT TATCGCAGCC GGGCCTTGCA TCGTCACCCA GATTCGTACA CCCGAACGCG ATGGCTATAG CGCGGTGCAG CTCGGTTACG AGGAAGTAGA AGCGCGCAAG CTCACCAAGC CCCAGCAGGG TCATCTCAAG GCATCGGGCG GTAAGATGTT GCGCTATCTC CGTGAGTTTA GCGCCGACGA CCCACTTGCC CATAAACCCG GTGAAGTGGT GACAGTTGAG CTGTTCAAGC CCGGCCAGAA GGTCGATATT TCAGGAACCT CAAAGGGTCG TGGCTTTGCG GGTGTCGTCA AGCGGCACGG CTTCCGTGGT GGCCCTAAGA CCCACGGCCA AAGTGACCGC CACCGTGCTC CCGGTTCGAT TGGAGCCGGG ACCACACCCG GTCGTGTATG GAAAGGCCAG CGTATGGCCG GTCGAATGGG CGGCGACCGC GTCACCATCC AGAATCTGGA AGTGGTTGAA GTACTGCCCG AACAGAATTT GCTACTGGTA AAGGGCTCCG TTCCCGGCGC CCGCAATGGC CTGCTTCAGA TCCGCAAAGC GGTGAAGGGC TAA
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Protein sequence | MIHGLLGRKI GMMQYFTKEG RAIPVTVIAA GPCIVTQIRT PERDGYSAVQ LGYEEVEARK LTKPQQGHLK ASGGKMLRYL REFSADDPLA HKPGEVVTVE LFKPGQKVDI SGTSKGRGFA GVVKRHGFRG GPKTHGQSDR HRAPGSIGAG TTPGRVWKGQ RMAGRMGGDR VTIQNLEVVE VLPEQNLLLV KGSVPGARNG LLQIRKAVKG
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