Gene Cagg_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2873 
Symbol 
ID7267581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3529478 
End bp3530284 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content57% 
IMG OID643567696 
ProductHhH-GPD family protein 
Protein accessionYP_002464171 
Protein GI219849738 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTAT CGCAATCCAA CCTTCTCTCT CAACCCTGGT CGTGGCTGGT CAACGAAGTC 
TATCGAAGAT TGGTGGATCA TTTTGGCCCA CTGTATGGTC CACGGACCGT GCATCCGTGG
TGGCCGATTA TCAGTACCGA ACCGCAGCTT GAGATGGTCA TCGGTGCAGT GCTGGTACAA
CAGACACGCT GGGAAACGGT TGAGGATGCG ATCGCCCGCT TGCACGCTGC CGGTTTGATC
GATCTCGTTG CGTTGGCGCA GGCCGATGCC GGTGAGTTGG CACGGCTGAT CTATCCATGT
GCTTTTTATC AGCAGAAGGC AAACGGCTTG ATCGCCTTAG CCCGGATTGT TCGCGAGCGT
TACGGCGATC TGGCGACTCT GTTGCGCCTT CCTGCCCCGA TGCTGCACAC CGAACTCTTG
CAATTGCCAC GGATTGGGCC AGAGACGGCA GATGTGATTA TGCTCTATGC CGGTGGGTAT
CCACGTTTTG TCGTTGATGC CTATACCCGG CGGATTTTTG CCCGACTGGC GCCCGATCGG
TTGGCTTGGG AACGGGCTAG CTACGTGCAG GTTCAACAGA CCATTGCCTC CGCATTGCCT
GTCGATCCGG TGCTGTTGGC CGATCTCCAC GCCCAGTTGA ACGAGCTGGC TGTGCGCTAC
TGTCTGGTAC AGCCGCGTTG TGATGGCCCG CCTTCACGAC GAATCTATTC GCGCCAACCC
GGTCGCAACA GTTTTCTCGA CCGGAATGAT GGTTGTCCGC TGCGTGAGAT ATGTAGGTGG
TATCGGAGTC AGGGGCGGGC CGAATAG
 
Protein sequence
MYLSQSNLLS QPWSWLVNEV YRRLVDHFGP LYGPRTVHPW WPIISTEPQL EMVIGAVLVQ 
QTRWETVEDA IARLHAAGLI DLVALAQADA GELARLIYPC AFYQQKANGL IALARIVRER
YGDLATLLRL PAPMLHTELL QLPRIGPETA DVIMLYAGGY PRFVVDAYTR RIFARLAPDR
LAWERASYVQ VQQTIASALP VDPVLLADLH AQLNELAVRY CLVQPRCDGP PSRRIYSRQP
GRNSFLDRND GCPLREICRW YRSQGRAE