Gene Cagg_2756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2756 
Symbol 
ID7269826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3380947 
End bp3382848 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content56% 
IMG OID643567577 
ProductABC-2 type transporter 
Protein accessionYP_002464055 
Protein GI219849622 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAACA CGATCAAACA GCCGCTAAAG CAGGCGACGG GCTGGAGTGC CGTCGGTGCG 
GCATTAACGG CGCGGCGTGG TGCATTGGCG TTATATCAGT GGCTATGGCT CATCCTTTGT
ATCGCCGGTG CGTTAAGTGT AGCCGTTCCA CCGATTTTAG CCCGCCCGAT TCTATACTAT
GCCGATGCTA CTGTACAGTT CGATCTGAAA CGCTATGGCC CCATCTACCA GCCGGTTGCC
CCTAATCTGA CAGGGATTGA TATTGCGATG ACCGATGCTA CCGAAGCGCT ACGCCTCGAT
GCGTTGGCCC GCGCTGATGT GCGTCTTGGC CGACCCGATT TTCGGGTAGC GTATCTACCC
CAAACTCCCG GTGAGGTGAT AGTGCGCGGT ATCGCCGGTA ATGCCGTTGA AGCAAAGGCA
CTGGCCGATG CCGGTGCGGC CGAGCTGGTG CGCCAAATCC GGGCTGCCGG TGGCCGTGAA
ATCTTGCGCA ATATGTTGGG CTGGCAATTG TGGCAAGCGC TCAACGGCCA AACACCGGCC
CCCAATGATC GCTTTGCATG GTTGTTGCGC GATATTTTGC GTCTTGAGGC TTTGCCGCTC
TCTCGCCCGA TTGAACCGTT CAGTACGCCG CGCACCTTGG CCGAACTCTC CGGTGAAGAA
ATTAGTGATG TGACCCGGGC GCTTGAGTCG CGTTACGATC TCTGGCGGTT TGCGATTAAT
ACCCGTGACG CAACGCTCGA TGCGCTCTGC GCAAGTACGG GTTTGACCGA TACAGCGACT
CGTGAAGCAG TACTACAGAC ATGCGCCGCT AATAATCCTG CGGCGGCTGC TGAACTTGCA
GCACGTGATC GGACGATTGC TCAGCTCCGC GCGATTGAGG CGGCAATTCA ATTCCTGATT
CGTGATGCCG GCGCCCGCTT TGATGCCGAT CAGGTGAGTG CGGCCTTCCG AGTGTCGGCA
GCGTTGCCCA CTGCGCCCGA ACCACGCTAT GAGTTGCCGC TGATCGCACT GGCCGCGCTT
GTCGGTACGA TGTTAGGTGT CGGGGGAATT GCTTTCGACC GGAGCGTCGG GGTGTTGCCG
AAGTTGCAAG AGCTGTGGCA ATACCGCGAA TTGATCCGTA ATCTGGTGCT TCGTGACCTG
CGCGCTCGTT ACAAAGGTAG TACTCTCGGC TATCTGTGGA CGCAGATTGC GCCGTTGGGC
ATGATGATGG TGTATGTTAT CGTCTTCAGT TTTCTGCTGC CTAACGGCAT TGCGATGTTT
CCGGTGTTTG TGATTGTCGG TCTGCTGCCG TGGAATTATA CTGCTGAAGC AGTCCTCAGC
GGTACCCGCA GCATTATCGA CAACGCGGCA TTGGTCAAGA AGGTCTATTT CCCGCGCGAG
GTGCTGCCAC TGGTTGCAGT TGGTTCAAGT TTGCTGAACT TTGTACTCTC ACTTCCGATG
ATGTTTCTGG TGATCGTGAT TGTTCAGCTT ACCACGCTTG GCCGGCTCAA CCTGAGTTGG
AGTATTGTCT ATCTGCCGGT TATCATGGCG TTGCAGACAA TTTTTCTCAC CGGATTAGCC
CTTTTGCTCG GCGCTGGTGC CGTCTTTTTC CGCGATGTGG TGCATCTCAT CGGTATTGTG
ATCAACATCT GGTTCTTCCT TACCCCGATC ATTTACCCGC TCAGTACCAT TAGCGACGGG
GTCGCGGCGC GGGTGATTCG CTGGCTCAAC CCGTTAGCCT CGATTATCGA GTTCTACCGC
GAAATCATTT ACGGTAATAC CGTGCCGGTC GGCCTGATCC CGACGCCGGG AGTGCCGGCG
CTTGGTGCTC TGCTGCGCGT TGGCGTCACT GCGCTGATTG TATTGGCAGT GGGGTATTGG
GTTTTCCAGC GCACCAGTCG CCATTTTGGT GAAGAGCTAT GA
 
Protein sequence
MANTIKQPLK QATGWSAVGA ALTARRGALA LYQWLWLILC IAGALSVAVP PILARPILYY 
ADATVQFDLK RYGPIYQPVA PNLTGIDIAM TDATEALRLD ALARADVRLG RPDFRVAYLP
QTPGEVIVRG IAGNAVEAKA LADAGAAELV RQIRAAGGRE ILRNMLGWQL WQALNGQTPA
PNDRFAWLLR DILRLEALPL SRPIEPFSTP RTLAELSGEE ISDVTRALES RYDLWRFAIN
TRDATLDALC ASTGLTDTAT REAVLQTCAA NNPAAAAELA ARDRTIAQLR AIEAAIQFLI
RDAGARFDAD QVSAAFRVSA ALPTAPEPRY ELPLIALAAL VGTMLGVGGI AFDRSVGVLP
KLQELWQYRE LIRNLVLRDL RARYKGSTLG YLWTQIAPLG MMMVYVIVFS FLLPNGIAMF
PVFVIVGLLP WNYTAEAVLS GTRSIIDNAA LVKKVYFPRE VLPLVAVGSS LLNFVLSLPM
MFLVIVIVQL TTLGRLNLSW SIVYLPVIMA LQTIFLTGLA LLLGAGAVFF RDVVHLIGIV
INIWFFLTPI IYPLSTISDG VAARVIRWLN PLASIIEFYR EIIYGNTVPV GLIPTPGVPA
LGALLRVGVT ALIVLAVGYW VFQRTSRHFG EEL