Gene Cagg_2465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2465 
Symbol 
ID7266189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2993202 
End bp2994485 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content60% 
IMG OID643567291 
Producthypothetical protein 
Protein accessionYP_002463773 
Protein GI219849340 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.139636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACC ACTTCGATGT CATCATTGTC GGTGATACTG CTGCCGAGGC AGCACTCGCT 
GCGCTGCTTG CTCGTGATGG TCGCGCTGTG CTGCTCGTAA GTGCCGGGAC GACGCAGCCA
CAGGTGTGCT GGCGCGGTAT GCAGTACGAT ACCTTCCCTC CCCAGTGGGC CGGTCTGAAT
GACGGGCCAT ACGCTCGCAT TGCCGCGCAT GTAGGGGTTT ACCTTCCGGT CGTCCGTCGT
GAGCCGGCAT GGCGGGTGCA TCTACCTGCA CGTACCATTG ACGTGCCGAG CGATATGGGA
CAGTGGCGAC GGACGCGCCG GGCACTCTTT CCGGCGCAGA CCGATGCGGC AAGTCGCTTT
TGGCAGGCCC AAGAGACCGC AGCAATGGCT GCGTTACGGT TGGCCGAGCA GTTTGATCCG
CTCGCTCAAA TTCAGGTGCT GCGTCAGCAA CGAATCACGG TGGCCGATAT GCTGCGGCGC
TATGGGTTGG TCGACCCGGC GTTACGTCAC TTCATCGATA CCATGCTCAT GGCCTATGGT
CTACCGGTCA GTGACCATTG CGCATGGTCG GCCGGTAGTG TCGCATTGCT GCCACCGGCA
GAAACGTTAG TCGGTAATGC AGCGACATTG TCCCGGCTGT TCGTCGATGC GTTGCTACGC
GCCGGTGGTG AATGGCGACG GCATCAACGT GCGGTGACGT TGCTCACGAC GCCAACCCGA
GTTGTGGGTA TTGGTTTGAC CGGTGGTGAA AGGGTCACAG CGCGGGTGGT TGTGCTTGGC
GTTGCCGCGT GGCGATTAGC TAATCATCGC CATAACGCGC TGCCGGCATG GGCTACGAGC
TACGTTGCCC TTGATAATGC ACAGGTACCG GAATATCTCC CATTGTGTCA GATTGTAGAC
GTTGGGGGGA CGCCGGTATT AATCAGCGTA TCACCGACCG ATGATCAAGC GGCTTGTCGT
ACTCTCACCG TTGCGATGCG GTTATCCGCC GCCGAATCGG CTCAGTTACG TTCCGCCTCT
CGCCATAAAC GCGGGCAATT CCGCTCTCAA CTTGCTAAGG TCTTGCAAGA AGCGATTGCT
AAGGTGCTAC CGCAGATAGC AACGACTCTG CCGGGCATTG AGGTTGTTGC GCCGTTGCCC
GATCCGGTAG TGCCGAGTGC TCGACCGCCG GCAGCACAGG CAGGCTTGTG GCTGTTGCGT
CCGCCGGCAT GGTTACCGCC CGGCTATGAT AATGGCAGTG GCACATTACG CCTCTACCGA
CAGTTGCGTG GCCTAATATG GTGA
 
Protein sequence
MSDHFDVIIV GDTAAEAALA ALLARDGRAV LLVSAGTTQP QVCWRGMQYD TFPPQWAGLN 
DGPYARIAAH VGVYLPVVRR EPAWRVHLPA RTIDVPSDMG QWRRTRRALF PAQTDAASRF
WQAQETAAMA ALRLAEQFDP LAQIQVLRQQ RITVADMLRR YGLVDPALRH FIDTMLMAYG
LPVSDHCAWS AGSVALLPPA ETLVGNAATL SRLFVDALLR AGGEWRRHQR AVTLLTTPTR
VVGIGLTGGE RVTARVVVLG VAAWRLANHR HNALPAWATS YVALDNAQVP EYLPLCQIVD
VGGTPVLISV SPTDDQAACR TLTVAMRLSA AESAQLRSAS RHKRGQFRSQ LAKVLQEAIA
KVLPQIATTL PGIEVVAPLP DPVVPSARPP AAQAGLWLLR PPAWLPPGYD NGSGTLRLYR
QLRGLIW