Gene Cagg_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2139 
Symbol 
ID7267647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2630847 
End bp2631950 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content57% 
IMG OID643566971 
ProductparB-like partition protein 
Protein accessionYP_002463459 
Protein GI219849026 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00187348 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCGAA AACGTGGCCT GGGGAGTGGA TTAGATGCAC TCTTTCCGGC AACCACCACC 
GACCAAACGG TTGTGCGCTC GTTACCGGTA GCGGCAATTC GGGCGAATCG GGCCCAACCG
CGTACCTCCT TCGACGAAGC AACATTGGCC GAATTGGTAG CTTCGATCCA AGAGCACGGT
ATCCTTCAAC CGCTGATCGT GAGCGAAGAT CCGGAAGGTG GCTATGAACT GATCGCCGGT
GAACGACGCT TGCGTGCCGC GCGGATAGCC GGCCTGACAA CGGTACCGGC TATTGTTAAG
AACGCCACTC CCCAGCAATT CCTTGAACTC GCTCTCGTCG AAAATATCCA GCGCGCCGAT
CTTAACCCCA TCGAAGAAGC GCAAGCTTAC GAAACTCTGC GACGTGAGTT CGGGATGAGC
GATGAAGAAA TTGCGCGTCG GGTTGGTAAG AGCCGGGTAG CTATTGTCAA TAGCCGTCGT
CTCCTCCGCC TCGCACCGGT CGTGCGCCAA GCGCTCCTCG ACGGTGCAAT CAGTGCTGGT
CACGGGCGTG CCCTGTTGCG TCTTGACGAT CCTGCCGACC AAGCCGCAGC CCTGACCTTG
ATCGGCGAGC GTGGCTTAAC TGTGCGTGAT GTGGAACACC TCACCGAGCT GGCGAGTCAA
GCTGGCCTGA CGGCACGTAC TCGTCAGGCC CTCTGCACCG GCCAGATCGA ACCGACACAG
GCGCTGGCAC TACTCCGCAT ATCCGATCCA CAGCTCCAAA CGGAAGCGTG TGAGGCGGTT
ATCCAGCATC GCCTCAATGT ACTTGAAACT GAACAATTCT GCACGGCTCT GGCTGCCGGT
ACCGATCAGT ATACTGCGCT GGCTGCGCTG CATCAGCCAC TGGGAGCGAA ACCCACCTCG
GATGCAACAC CACGCTTGAA CGCTGAACAA ACCCGCCCAG TACGGCGCTC GCCTGCAGAT
CAGATGGCTC AGCAGATGTT TGAAGAACTA TTGCAAACTC CAGTTCACAT TGTTCGCAGT
GGACGCACTA TCAGAGTAAC TATTACGCTG TACGATGAAG AGCAGTTACA GGGGTTGTAC
GATCGTTTAT TGGGGAATGG CTAA
 
Protein sequence
MSRKRGLGSG LDALFPATTT DQTVVRSLPV AAIRANRAQP RTSFDEATLA ELVASIQEHG 
ILQPLIVSED PEGGYELIAG ERRLRAARIA GLTTVPAIVK NATPQQFLEL ALVENIQRAD
LNPIEEAQAY ETLRREFGMS DEEIARRVGK SRVAIVNSRR LLRLAPVVRQ ALLDGAISAG
HGRALLRLDD PADQAAALTL IGERGLTVRD VEHLTELASQ AGLTARTRQA LCTGQIEPTQ
ALALLRISDP QLQTEACEAV IQHRLNVLET EQFCTALAAG TDQYTALAAL HQPLGAKPTS
DATPRLNAEQ TRPVRRSPAD QMAQQMFEEL LQTPVHIVRS GRTIRVTITL YDEEQLQGLY
DRLLGNG