Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2019 |
Symbol | |
ID | 7269177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 2478036 |
End bp | 2481086 |
Gene Length | 3051 bp |
Protein Length | 1016 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643566853 |
Product | GAF sensor hybrid histidine kinase |
Protein accession | YP_002463343 |
Protein GI | 219848910 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.25506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATTGG TAATACCGCG AGTGTATAAT AAAATTATGA CAAACCAAGA CACACCATCT GACCAATCTG CCGTCACCTC ACCGATCGCC ACCATTCTTG CACTCAGTAA GGCAGTTCTT TCATCGCTCG AACTGCCGGA TGTGTTACAG CGTGTATTAG TCGCCACTCG TGATCTAAGC GGAGCCGATG TTGTGACTAT CTGGCTGCTC GACGAGCAAG GCGAGTGGTT GACAAGCGCT GCTATCCTTG GGCTTGAAGA CCGTCCTGAG CGTGAACGTA TCTTCCGTTT GCGGGTCGGT GAAGGTATTG CCGGTTGGTC AGTTGCCCAT CGTCAAATCC TCCAAATTAC CAACCCACTT CACGATCCAC GCTACGTACC CAAACTCGAC CGCCATCCGG CTATTATACT CTCTATCCCT CTGATCGTTC GCGCGCAGTG CGTCGGTGCG CTTAGCCTAT CTCGCTACAC TGTCGCCACA CCGTTTAGCC AAGAAGTTAT CGAAACGATT TCTATTTTCG CCGATCAGGC TGCCATCGCT ATCGACAACG CTACAAAGGC TCAGATCCTG CGTTACGCCA CAGCACGCGA ACGAATCTTG GCCCATAGCA CCGAATCGAC CCAAGCCGAA ACGTTGATCT TGGCCGAATT AGCCGTCGTC CTTGGGGTCG AACCTCTCCT TATTAGCACC ACGTATGATG GGAACCTTCT CGATCACGCC GGTCACAACG TTCACTACGA TGACCTGAAC CGCTGGCGTA ATGAAGGCGC GCTGATCACC GATCTACGTT TCGATGGATT ACCGGCATGG CTAGTAGTCA ACCAACCGGG CCGCTATTGG AGCAAAGAGG ATACTAACCT GCTTGCTTTT GCGGCCAATC AATTGATGCG TGCCCGCCAG CGCGCTTTCG AGCAACGCGC ACACGCTCGC GCCGAAGCGC TGCACCGTCT CGTGGCACTG ACCAACGCAC GCATCGATCA GGCCAGCGTG CTTGATCAGA TCCTGGCCGA ATTGCAACGA TTTATCCCGT TCGACTCGGC TTGTGTCTTC GTTGTGCATG ACGATGAGTA TGTCCGCCTC ATTGCCCAGC GTGGTCTGCG TACTCCGGTC GATCAAGTAA CTCTCTTCGC CGGACCGGGT TCAACGATTT ATGATCTGCG TCAAGTCGGT ACGGCAAGGT ATCATCCCGA TGTACAGCAA TTACCCGGTT GGCAGAAGGT ACCCGATAGC GAGATCATCC GTTCCTGGAT CGGTGTACCA CTGCGGGTTG ATCAGACCAC AATTGGCTTT TTAACGATTG ATAAATGGAT CCCCAATGCC TTCACTGCCG AAGATGTCGG TACGGCACAG ATGTTTGGCG AACAGGTTGC CGCCGTCATC AATAACGTTC GTCTTCTACG TGAGGCACAA GAACGGGCCA GCCAATTTCA GGTTCTGCAA CAGTTCACCG TCCGTATTGG CGCCGTCCGT GATATCGATC AATTGCTCGA TGAAGCTACC CAATTGCTTC ACCGTACCTT CGGGTACTAT CAAGTACTCA TTAGTGTCAT TGAGCATGAT CAGCTCATCG TGCGTGCTGC CTATGGTCGC CTGATGCACT GCCAATCGAG CGAACAGGTC TTTCCCCCCT TGCCGTGTGA TGTCGGTATC AGCGGTTGGG TCATTCGCCA TGCCCAACCG GCAATCGTCA ACGATGTCCT CCGCGACGAA CGCTATGTCT GCCATCCCTT TCTGCCGGCT ACTGCGGCTG AAATGATCGT CCCGATTTTG GTTGACGAGC GTGTATTCGG CGTCATCACC ATCGAAAGCG ATGTTCGCGG GGTGTTTGCT CAAAGTGACC TCGACTTGGT GACGGCAATG GCTCATCTGA TCGGTGTCAC TATCGCTAAC CTTCAACACG ACGCCGAACT CCAGCGCGCC CGTGAACAGT TGATCGAACG TGACCGATTA CGGGCACTCG GTGAGTTATC TAGCGGTGTG GCTCACGATT TTAACAACTT ACTGGCGAGC ATTCTTGGTC ACGTTCAGTT ATTGCTCAAC GAGTACCACG ATCCACGATT GCAAGAGGGG TTACGGGCAA TTGAGTTAGC TGCGATCGAT GGCGCAGCTA CAATTAAACG TCTGCAAGGA TTTGCCCAAA CCAGCCAATC GACTCCACAG GGTGCTGTTG ATCTTAACCA AGTGGTCGAA GAGAGTCTGG CGTTGACTCG TCCCCGTTGG CGCGACGAAG CACAGAGTCG TGGGATCGTG ATCGAGGTGC GTACCGACCT AGAGCCGTTG CCGATAATTA CCGGTGATGC TCCTGCGTTA CGCGAATTGA TCATCAATCT CGTGTTAAAC GCCATCGACG CACTACCCAA TGGTGGGACG ATAACGATCC GTACTACTCC TGCACCTCCT GAGGTGTTCG GCGCAGCCGG TGTGCTGTTG GTGATCCAAG ATAATGGTGT CGGGATCGAT CCCGCCCTCC ACGAACGGAT CTTTGCACCC TTCTTTTCGA CCAAAGGTGT GCGCGGTACC GGAATGGGGT TGGCGATTGT TCGTGGTATC GTGCAACAGC ATGGTGGACG GATTACGCTC GAAAGTGAAC CCGGTAAAGG TACGATGTTC CAGATTTGGC TGCCGGTAGG GCAACCACCG GAACTACCCA CCTCATCATC ACAACCGTCA CCTATGGTGC CGCTGCACAT TTTAGTGGTT GATGATGAAA CGGCGGTGCG GCAGGTGCTG ACCCGCATCC TTGAGCGTCA GGGTCATCGG GTCGTCGAAG CTACTTCGGG CGAAGAAGCA CTTGCCCAGT ATCGGCCCGG TCGGTACGCG ATTATCTGTA CCGATCTCGG CATGCCCGGT ATGTCAGGCT GGGAATTGGC CTCACGGGTG CGACAGATCG ATACAACGGT TCGGATCGTT CTGGTGACCG GCTGGAGCGA ACAAGTTGAT CCGGCTGATA TGCAGCGGTA CGGTGTCAAC GCGATACTCG CCAAACCGTT TACAATCCAA TCGGTGCAGA ATCTCATTGC TAGCTTAGTT GACGCAGCCG AACAAGTATG A
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Protein sequence | MLLVIPRVYN KIMTNQDTPS DQSAVTSPIA TILALSKAVL SSLELPDVLQ RVLVATRDLS GADVVTIWLL DEQGEWLTSA AILGLEDRPE RERIFRLRVG EGIAGWSVAH RQILQITNPL HDPRYVPKLD RHPAIILSIP LIVRAQCVGA LSLSRYTVAT PFSQEVIETI SIFADQAAIA IDNATKAQIL RYATARERIL AHSTESTQAE TLILAELAVV LGVEPLLIST TYDGNLLDHA GHNVHYDDLN RWRNEGALIT DLRFDGLPAW LVVNQPGRYW SKEDTNLLAF AANQLMRARQ RAFEQRAHAR AEALHRLVAL TNARIDQASV LDQILAELQR FIPFDSACVF VVHDDEYVRL IAQRGLRTPV DQVTLFAGPG STIYDLRQVG TARYHPDVQQ LPGWQKVPDS EIIRSWIGVP LRVDQTTIGF LTIDKWIPNA FTAEDVGTAQ MFGEQVAAVI NNVRLLREAQ ERASQFQVLQ QFTVRIGAVR DIDQLLDEAT QLLHRTFGYY QVLISVIEHD QLIVRAAYGR LMHCQSSEQV FPPLPCDVGI SGWVIRHAQP AIVNDVLRDE RYVCHPFLPA TAAEMIVPIL VDERVFGVIT IESDVRGVFA QSDLDLVTAM AHLIGVTIAN LQHDAELQRA REQLIERDRL RALGELSSGV AHDFNNLLAS ILGHVQLLLN EYHDPRLQEG LRAIELAAID GAATIKRLQG FAQTSQSTPQ GAVDLNQVVE ESLALTRPRW RDEAQSRGIV IEVRTDLEPL PIITGDAPAL RELIINLVLN AIDALPNGGT ITIRTTPAPP EVFGAAGVLL VIQDNGVGID PALHERIFAP FFSTKGVRGT GMGLAIVRGI VQQHGGRITL ESEPGKGTMF QIWLPVGQPP ELPTSSSQPS PMVPLHILVV DDETAVRQVL TRILERQGHR VVEATSGEEA LAQYRPGRYA IICTDLGMPG MSGWELASRV RQIDTTVRIV LVTGWSEQVD PADMQRYGVN AILAKPFTIQ SVQNLIASLV DAAEQV
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