| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1933 |
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| Symbol | |
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| ID | 7268848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 2364932 |
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| End bp | 2366833 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643566770 |
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| Product | VanW family protein |
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| Protein accession | YP_002463264 |
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| Protein GI | 219848831 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0945976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000296122 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGATC ATCGCTACTA TCCAGAATAT GGGCCGATTT ATCGCCGTCG CGCGGCAAAG
GGTGGGTTCA CCCCTCATGA GGACTCACCC GCTACCGAGA CGCGCCGACC ACGTCCGCGC
CGTCCATTGC GTCGCCGGTC TCGCGGCTGG ATGTGGCTGG CACTCGCGCT ATTCGTCCTG
ATCATCGGGC CGGTTGGTGC GATCTATGCC GTTGACCTTA TCTACCCCAA TACCATTTTG
CCCGGTATCT CACTCAACGG CGAACCAATC GGCGGACGTA ATCGCACCGA GGTCATCATT
GCGTTGCGTC AGCGGTATCG TGCATTTGAA CAGCAGCCGG TAACACTCAC TTTCCGTGAT
TACGCCTGGC AGCCCTCATT GACCGAATTG GGGGTAACAT TTGACCTGGA ACGGGTAGTC
AACAGTGCAT TTGCGCTTGG TCGCAGTGGC GATCTCTTCA CCCGCATCGG TGATCTGTGG
ATGCTGTGGC AAAAAGGAAT TGACCTCCCA CTGCGCATGT CGGTTGATCT TAGCCAAACT
CAGCGTTACT TACTGGGGAT AGCACCGCAG ATTGAACAGT TGCCCGCCAA TGCCGTCCTC
AGTCTGGCCG ATGCCCGTGT TATCGGTCAA CCGAGTCAAC CCGGAACGCA ACTGCTGATC
GATGCAACGG CTAACGATGT ACTGCTTGCC ATTCAGCAGC TCCGCCCACA GACGGTGGCG
GTGCGAACCC GTCAGCTCGC ACCCCAGATC GATGATACCG ATCTGGTGAT CGCTCAACAG
ATCGCCGTCA ACTTGCTGCG TAGCCCGTTG GAATTGGTGG TCGAAGATCA GACCATCGTC
TGGTCTCCTG AACGAATTGC CGAGTTGTTG CAGGTGACGC CGGTTGACGG TCAATTGACG
GTACAAGTCA ATCAAGACCG GCTCAACCGC GCAGTCGAAG GCTTAGCCCA GAGTATCGAT
ACCGGTACTG CCGAACCACG TCTCCGCTTC AGTGATGGCC GAGTACGGAT CGTAGCCGAG
GGTCAGCCGG GCCGGCGCTT ACGGCAGGCC GATGCCGCCA CTGCAATTGC CGATCTGCTG
ATGCAACCCT CACCGATCAC TCGGACCCTC GTGTTGCCGA TAGACCGTAT CGAACCACGG
ATTACGGCTG CCACACTCGA TAGCCTCGGC ATTGCCGAAT TGGTTGCCGA AGGGCGCAGT
AGTTTCGCCG GCTCCGCACC ATACCGCATT ACTAACATTC GGGCCGGCGC TGCCCGTATG
AACGGTGTCC TGATCGCGCC CGGCGAAGAG TTTTCGTTTA ACCGTCAGCT TGGTGAGGTC
AATGCCGAAA ATGGCTTTGT CGAGGGTTAT GCCATTATCG GCAACCGTAC CCAACTCGAA
TGGGGCGGCG GTGTCTGTCA GGTTAGCACC ACTGTCTTCC GGGCCGCATT CTGGGCCGGC
CTGCCGATCA CCGAACGCCA CGCGCACTCG TTCTATATCA GTTGGTATGA CCGGTTTGGG
CTTGGCCCCA ATGGCGACGG GCAAGGCTTG GATGCTGCTA TTTTTACCGG TGTCCAAGAC
CTGAAATTCG TCAACGACAC AGGGTATTGG CTGTTGATGC AGACCAGTAT TGATGAGCAA
GCGCAGGTAT TGGTGGTACA ACTCTACGGT ACCCGACCCA AACGCGAGGT ACGGATCGAG
GGGCCGATCA TCAGTAACGA AGTACGTGCT CCGAGCGAGC CGGTCTATGT CGATGATCCC
TCGTTGCCAC GCGGTACCAT CCGGCAAACC GATGTCGCAC GCAACGGACG CGACATCTCG
ATTTACCGTA TTATCACCGA CGCCAACGGC CAAGAGCAAC GGGAACTCTT TTTTACCCGC
TTCCGACCAT GGCCAAACAT CTTTGTACGG GGCACCGGGT GA
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| Protein sequence | MPDHRYYPEY GPIYRRRAAK GGFTPHEDSP ATETRRPRPR RPLRRRSRGW MWLALALFVL
IIGPVGAIYA VDLIYPNTIL PGISLNGEPI GGRNRTEVII ALRQRYRAFE QQPVTLTFRD
YAWQPSLTEL GVTFDLERVV NSAFALGRSG DLFTRIGDLW MLWQKGIDLP LRMSVDLSQT
QRYLLGIAPQ IEQLPANAVL SLADARVIGQ PSQPGTQLLI DATANDVLLA IQQLRPQTVA
VRTRQLAPQI DDTDLVIAQQ IAVNLLRSPL ELVVEDQTIV WSPERIAELL QVTPVDGQLT
VQVNQDRLNR AVEGLAQSID TGTAEPRLRF SDGRVRIVAE GQPGRRLRQA DAATAIADLL
MQPSPITRTL VLPIDRIEPR ITAATLDSLG IAELVAEGRS SFAGSAPYRI TNIRAGAARM
NGVLIAPGEE FSFNRQLGEV NAENGFVEGY AIIGNRTQLE WGGGVCQVST TVFRAAFWAG
LPITERHAHS FYISWYDRFG LGPNGDGQGL DAAIFTGVQD LKFVNDTGYW LLMQTSIDEQ
AQVLVVQLYG TRPKREVRIE GPIISNEVRA PSEPVYVDDP SLPRGTIRQT DVARNGRDIS
IYRIITDANG QEQRELFFTR FRPWPNIFVR GTG
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