Gene Cagg_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1892 
Symbol 
ID7266383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2322647 
End bp2323834 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content60% 
IMG OID643566729 
ProductFAD linked oxidase domain protein 
Protein accessionYP_002463223 
Protein GI219848790 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCT CTGATACGCC TTCAATTGCG CTCCCGGCCA GCTACACGCT CGCCGGACAG 
CAACCACAGC GAGTAGTCCA ACCGACGACC ATTGCCGAAC TGGCAACAGT CGTCGGTGAA
GCAGCTCGTA CCCATACAGC GATAGTGCCA TGGGGTGCGG GAAGCCGTCA GTGGCTGACC
AACCCACCAA CACGGTACGA TGTCGCCCTC GATCTCCGTC GACTTGACCG GCTGATTGAG
TACCACCCTG CCGATTTGGT GGTGATGGTC GAAGCCGGCG TCACGCTCGG TACAGTTCAA
TCGCACCTGG CTGCACAGGG GCAGTGGTTG CCGTGGGACC CCTTCGCACC ACTCGATGCC
ACCATCGGCG GTTTGTTGGC GACGGCGGCA TGGGGACCAT TGCGTTTAGG CTACGGCGGA
CCGCGTGAAT GGTTGCTTGG GATGCAAGTT GTCCTCGGTG ATGGCCGCCT CGTCCAGAGT
GGTGGACGGG TCGTGAAAAA CGTTGCCGGT TACGACACCC ACAAACTGCA CCTTGGTGCA
TTCGGCACGC TCGGCGTGAT TGCGACGGCT ACGTTCAAAG TCGCTCCCCT GCCAGAACAG
ATGGCGTCAC TGCGGGTGAC CCTCCCAACC GTAACCGAAG CTCTGCACAC CGCAACTGCG
CTACGTCAAC CACCGCTCCA ACCGGTAGCT CTGACTATAA CGGTTAACGA AACGGTAACG
CTAACGGTGC GCTTTGCCGG CGTTGCTGCG GCAGTTGCGC GCCAACTTGC GCTGGCAGCG
GATCGGTGTG GGCGTTATCG AGATGTGACC GTGCAACACG ATGATCGAGT ATGGTGGTCA
ACACCGGCTA TGCCGCCACC GGATCAAACG CTCTGGCTGC GGATCGGCGT CCCTGATCAT
GGGTTGACGA CAGCCGTAAA CACAACGCTC CAGATTGCTC AACCCAACCT CACGATCTTT
CCGGGTCTTG GCTTATGCTA CGCACGGTGG CCGGCGGCAG CAGCTTCCCA TCTCCCGGCA
TTACGACAAA CGCTAGGTGG GATCGGTGGC TATGTCGTCG TCGAATATGG CCCCCACGGG
ATCGATCGTT GGGGACCTCC ACCGCCGAGT ATCGATCTTA TGCACACGCT CCGACAACGC
TGGGACCCCG CAGGGATTCT TAATCCGGGC CGCTGGCTTA TACCATAG
 
Protein sequence
MQISDTPSIA LPASYTLAGQ QPQRVVQPTT IAELATVVGE AARTHTAIVP WGAGSRQWLT 
NPPTRYDVAL DLRRLDRLIE YHPADLVVMV EAGVTLGTVQ SHLAAQGQWL PWDPFAPLDA
TIGGLLATAA WGPLRLGYGG PREWLLGMQV VLGDGRLVQS GGRVVKNVAG YDTHKLHLGA
FGTLGVIATA TFKVAPLPEQ MASLRVTLPT VTEALHTATA LRQPPLQPVA LTITVNETVT
LTVRFAGVAA AVARQLALAA DRCGRYRDVT VQHDDRVWWS TPAMPPPDQT LWLRIGVPDH
GLTTAVNTTL QIAQPNLTIF PGLGLCYARW PAAAASHLPA LRQTLGGIGG YVVVEYGPHG
IDRWGPPPPS IDLMHTLRQR WDPAGILNPG RWLIP