| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1689 |
|---|
| Symbol | |
|---|
| ID | 7268991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2061309 |
|---|
| End bp | 2063168 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643566531 |
|---|
| Product | glycoside hydrolase family 3 domain protein |
|---|
| Protein accession | YP_002463026 |
|---|
| Protein GI | 219848593 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGC AATATCTGCT TTGTCTTGTG ATGTTGGTCG GCGTATTTGG CGCTTGTGGG
ACGCTGAATG CACCCCCCGC TACACCGACA CCGGTCATAC CGCTCTACCG TAATCCGGCA
GCACCTATCG CCGAGCGGGT CGAGGATCTG CTACAGCGGA TGACATTGGC CGAGAAGATC
GGCCAGATGA CGCTGATCGA AAAAAATAGC ATCACCGCCG ATCAGGTACG TGAATTGGCC
ATCGGTGGTG TGCTCAGCGG TGGCGGTGGC TATCCAGACG ACGAGAACTC GCCGATGGCG
TGGGTGGAGA TGGTTAATGC CTTGCAACAG GCGGCATTGA ATAGCCGGCT CGGCATTCCG
ATCATCTATG GGGCTGATGG TGTTCACGGA CACAACAACC TCTACGGTGC CGTCATCTTT
CCGCATAACA TCGGGTTGGG GGCAGCGAAT GACCCCGCAC TGGTCGAGCA GATCGGGCGG
GTGACGGCCC GCGAGATGGC GGCTACCGGT GTCTTTTGGA ACTACGCGCC GGGGGTGATG
GTAGTGCAAG ATGTGCGTTG GGGGCGTACC TACGAAAGCT ATGCCGAACG TCCTGAACAC
GTTGCATCGT TGGCAGTCGC TTTTTTGCGT GGCTTGCAAG CTCCCGATAT TGCAGCACCA
AACCGGATCA TCGGCACTCC CAAACACTAT GTCGGTGATG GCGGTACGAC ATGGGGCACG
TCAACCACGG CAAACTATCA ACTCGATCAG GGGGAGACGT TTGGTGATGA AACCACGATC
CGAACCGTGC ATCTCCCACC GTACCGCGCG ACCATCGCTG CCGGTGCGCA TGTGATTATG
GCGTCGTATT CGAGCTGGAA CGGACAGAAG ATGCACGCCA GTTCGTATTG GCTCACCAAT
GTGCTGAAAG AAGAACTCGG CTTTACCGGT TTTATTGTCT CAGATTGGGA AGCCATCGAT
CAGATTGATC CCGACTATGA ACGGGCGGTG GTGACGGCCA TAAATGCCGG GATCGATATG
AATATGGTGC CTTACGATGC GGTGCGCTTC ATCGAGACCC TGACTCGCGC CGTCAATACC
GGTATGGTGA GCGAAACGCG GATTGACGAT GCGGTGCGAC GAATCTTGAC GACCAAGTTT
GCGATGGGGT TATTTGATCA ACCTTTCGCC CACACCGAAC TACTGGGCGA CATCGGTAGT
CCGGCCCACC GCGCATTAGC CCGTACCGCC GTTGCCCAAT CGTTGGTCTT GCTCAAAAAT
GACGGTAACC TCCTCCCCTT ACCGAAAGAT GTTGCCCATC TCTACATCGG TGGGCAGGCT
GCTCACGATC TCGGTATCCA AGCCGGCGGC TGGACAATTG AGTGGCAAGG GAAGCCGGGT
GCGATTATCC CGGGAACGAC GATTCTCGAA GGGATTCAAG CGGCTGTTAC AGCACAAACG
GTCATTGAGT ACGATCCACA CGGACGGTTT CGCGGTGATC CGATGGCGAC CGATGCCGTC
TGCATTGCGG TCGTCGGCGA ATTGCCTTAC GCCGAAGGAC GCGGCGACAG CGCAACCTTA
CGCTTACCAC CGAACGAACA GCGCACACTG CGTCGGATGG AGGAAAGCTG TGCCCGTCTC
ATTGTCGTAC TCGTCAGTGG CCGTCCGCTG ATCATCACCG ACGATCTGCC TCGTTGGGAT
GCGCTTGTCG CCGCGTGGCT ACCCGGTAGC GAAGGGGCCG GTGTCGCCGA TGTTCTGTTT
GGCGATCAAC CATTTCGCGG GCGATTACCG GTGACGTGGC CGCGCAGCCT CGATCAATTA
CCGCTCGGAT CAGGAAGCGG CGAGCCACTC TTTCCCTATG GATTTGGACT AACCCCATAA
|
|---|
| Protein sequence | MRLQYLLCLV MLVGVFGACG TLNAPPATPT PVIPLYRNPA APIAERVEDL LQRMTLAEKI
GQMTLIEKNS ITADQVRELA IGGVLSGGGG YPDDENSPMA WVEMVNALQQ AALNSRLGIP
IIYGADGVHG HNNLYGAVIF PHNIGLGAAN DPALVEQIGR VTAREMAATG VFWNYAPGVM
VVQDVRWGRT YESYAERPEH VASLAVAFLR GLQAPDIAAP NRIIGTPKHY VGDGGTTWGT
STTANYQLDQ GETFGDETTI RTVHLPPYRA TIAAGAHVIM ASYSSWNGQK MHASSYWLTN
VLKEELGFTG FIVSDWEAID QIDPDYERAV VTAINAGIDM NMVPYDAVRF IETLTRAVNT
GMVSETRIDD AVRRILTTKF AMGLFDQPFA HTELLGDIGS PAHRALARTA VAQSLVLLKN
DGNLLPLPKD VAHLYIGGQA AHDLGIQAGG WTIEWQGKPG AIIPGTTILE GIQAAVTAQT
VIEYDPHGRF RGDPMATDAV CIAVVGELPY AEGRGDSATL RLPPNEQRTL RRMEESCARL
IVVLVSGRPL IITDDLPRWD ALVAAWLPGS EGAGVADVLF GDQPFRGRLP VTWPRSLDQL
PLGSGSGEPL FPYGFGLTP
|
|---|
| |