Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1076 |
Symbol | |
ID | 7268528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1330309 |
End bp | 1332366 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643565921 |
Product | alpha amylase domain-containing protein |
Protein accession | YP_002462426 |
Protein GI | 219847993 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.819574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTACG AACTCTACGA ACAGTCCGAT CAGATCGTTC TCCGTACCGA CGCCTACGAG CTAGGTTGGT CAACTGAGAA TGGCGCATTA GTGCGTCTCC AACAACACGA TGGTCCGAAT GTGCTTGGCT TTGGCCCGGT GATCGCCGGG ATTGACATTG CGTTAGGTAG TGCAACGAAT TGGATCACAG CCCAGACATT TGCCCGCTAC ATCTGGCACC GCTTGAGCAT GCAAGAACAC CGACCGGTGA TGACGATCAT TATTGGGATT GGCCCACTCA AGCTATTCGA TCACTACCGC ATTGATGGCG AGGTGATCGA ACGTTGGATC GAGATTGAGA ATGTGAGTGG TGACGACCTG CGCCTATACG GCGTGCGGAT GATCGTACCA AACGTGCGGG TTGGTGATCC GAATCGATGT ACCTTCGATG CACCGGGCAA TAGCGTTCGA CCACGAACAC CGCTAACGAT TGCAGCCGGC CAGGATCGCA ACGTGCTTCC ACGCCGTTTC TTTGCCCCCG GATTGCGCGG TGGGAGCGCC TTTGAACCGT CGCCTACGCA AGGGGCAGGG GTAATGGCGT TATACGATAA CGACGTACCG CTCACATTCC TGTGTTGGTA TATCGGTGAT GATGAAGCTG CGTTACCTTA TGTGATGGGC AACGGTACGG CGGTCTCGCT AGCTTATGAA GTAGCTGTTA CCGGTTGGTT ACGCTCTGAA CAACGATTAA GAGTGGGCAC GCAATGGATC GGCTTACAGC ACCGATCCTG GCCGGCAGCG CTTGCCGTAT ACCGCGCACG CACCTCATTG CCACAACCAC CGGCGGCATG GTTGCGCGAT GCGATTCTCT ACGTAACCGA TCTGCGTCAA CACGGCGGAG CTGCCGGTCT TGCCGCACAA TTGCCCGAAC TGAAGGCCCT TGGCATTGAC ACACTATGCA TACTGCCGTG GCATACCGTT GGCGAACGTC CACACCTGAT CGGCGATCTT GAACGGATTG ATCCGGTCTG TGGCGATGAG CCGGCCATTC GCCGCATGAT CGAAACCGCC CATCAGCATG GGATGCGGGT ATTGCTCGAT GTGGCGATGC AAGGTTGTGC GCCCGACTCA CGCTACCTTA GCGAACACCC AGAATGGTTT GTACGCGACG ATTCGGGGGC ATTTGTCATC GGTGTGCCGA CCGACGCGCC GGCAGCAGCT CGCCATCCGG GTGTAGGCTT GCCCACGAAC GGCTATCACT TTGACTGGAC GCGCACCGAT TGGCGGTTGT ACTGGCAGCA ATGGGTGATC GCGCAGGTCG ACCGGTTTGC ACTTGATGGC TTACGGGTCA TCGCACCATA CCAGGCTGCC CCGGCCTGGA TCCGTCGACC ACCGTTGCGG GCGAGTTCTG GTACAGCGCT GATGGTACAG GCATTGCGTG AGATTATCGC TGTACGTCCG TCTCTTTCAC TCCTGTGTAC GCTCTCTGGC CCGCATTCAG CCCAATTCGC CGGCGGGTGG TTTGATTACC CCAGTCATCA TATGCTCATC CATCTTGCTA TGCGTCGGAT CACCCCGGCT GAGTGGTGTG CCTATCAAAC CGATTACGCC GATCTGTATC CGGCAGCCTA CCGGATCGGC TTTCTGGAGA TGCATGATAC CGCCGATTGC AACCCGTTGG CCGACGGTTT ACGCGGATCG CGTTTGGTGC AGGCGTTGTG GGCGGTGATG GTGTTTAGCG GGCTTACACC GGCGATATGG AACGGACAGG AGCATGCCGA TCGCACCGTC TTGCCGCGTT TGCTCGCACT CTGGCGGCAA GAACCGGCGT TGCGGCATGG GACGGTCACT TATCAAACGC TTACCACGGC ACCGGTCGAG GTGTTGACGA TTCGTCGCAC GCTGGGTGAG CGTATCCTGA CCGGAGTAGT TAATTTCGGT GCGCTCCCAT CACATTTGCT CGTTACCGAA CCGCTCGGCA ACGACCTACT CGGTATCTTT CCGCACAGTC GTGAGCGGCG TGGTGTGGGT GAGGTTGTTC AGTTGGCGGC ATTTGGGGTG TACTGTTTTG AGGGATGA
|
Protein sequence | MSYELYEQSD QIVLRTDAYE LGWSTENGAL VRLQQHDGPN VLGFGPVIAG IDIALGSATN WITAQTFARY IWHRLSMQEH RPVMTIIIGI GPLKLFDHYR IDGEVIERWI EIENVSGDDL RLYGVRMIVP NVRVGDPNRC TFDAPGNSVR PRTPLTIAAG QDRNVLPRRF FAPGLRGGSA FEPSPTQGAG VMALYDNDVP LTFLCWYIGD DEAALPYVMG NGTAVSLAYE VAVTGWLRSE QRLRVGTQWI GLQHRSWPAA LAVYRARTSL PQPPAAWLRD AILYVTDLRQ HGGAAGLAAQ LPELKALGID TLCILPWHTV GERPHLIGDL ERIDPVCGDE PAIRRMIETA HQHGMRVLLD VAMQGCAPDS RYLSEHPEWF VRDDSGAFVI GVPTDAPAAA RHPGVGLPTN GYHFDWTRTD WRLYWQQWVI AQVDRFALDG LRVIAPYQAA PAWIRRPPLR ASSGTALMVQ ALREIIAVRP SLSLLCTLSG PHSAQFAGGW FDYPSHHMLI HLAMRRITPA EWCAYQTDYA DLYPAAYRIG FLEMHDTADC NPLADGLRGS RLVQALWAVM VFSGLTPAIW NGQEHADRTV LPRLLALWRQ EPALRHGTVT YQTLTTAPVE VLTIRRTLGE RILTGVVNFG ALPSHLLVTE PLGNDLLGIF PHSRERRGVG EVVQLAAFGV YCFEG
|
| |