Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0638 |
Symbol | |
ID | 7266110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 784232 |
End bp | 786295 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643565499 |
Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
Protein accession | YP_002462011 |
Protein GI | 219847578 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCG CTGAGGTGCA GGTGATCGCG GTGGGAAGAC CGGATCGGGC GGGTAAGAGT CGCGAAGGCC GTCCGGTGGC GTTAGTGGTG GCAGTGGCTG ACGCGCAGCA TGCCGCGATG GCGCTGGACG CCTACCAAAG TGCGGATGCG GCAATGTTGC CTCATTTCTA CCTTGATCGG GATGGGACAT TGCATCAACT GGTCGCTCCT GTGCGGGCCG GTCATGGGTT GGGCCGGGCA ATTTGGCGGG GGCGAGTGCA TAATCTCGAC CGGGTGGCGG TGATTGTGAG CCTTGCAGCG CCGGCGCTGA CCGATCTGAG CGAGGCGCAA GCCACAGTGC TGGCTGATTG GTTGCCGGCG GTGGCCGCGC AACACGGCCT GTCGTTGGCT GATATTGGCA TGCTCATCAC TGATGCCCGC GGGAAGCGGA GGGTGTTGCC GTATTTGCCG TTGGCGGCGC CGGTTGCTCC TGCTGAGGGT GTTATCCTCG GCAGCGGCGT GCGCTCTCCC GAACAGGAGC TGTGGGTGGG TTTGGCAACG GTGACGTGGT GGCAGCGCGG TGGTCAATTG CGGCTCAACC AGGCCTTTTC GCTGCACTGG GGCAAGTTTG ATCTCGGCGC GCCGCTGGCC CCTAACGAGC CGCCGCCGGT GGCGCTCGAT GGTAAGACGT ATAACTTTCA GGTCTTTGCC CGCGATACGA TCTTCAACGA AGGCACCCAG TACGCTGCCG TGCAGAATTT AGCCAATCTG CTAGGGCCGG ACATCGGCGC AATTCCTGTC GGCGGAGTGA GCCGGGCCTT AATCGAGGCG AGCTATCGCA GTGCGTTGAA AGCGAGCGCG GCGCGCGCGC CGCTCGAGGG TAAAACCGAG TTTCGCGCCG ATTGGCGCTT CCATTTTGTG GCCTTGCAAG CCAAACTTGG CCCGGCCCTG AGCGGGAATT ACGTCACGGC TGACCGCGCG TTTGCGCTGC AAGTCTTTGC TGGCGACACC CTCTACACGC CGATGAGCCA GCAATCCGGT TGTTTCTTTC TCAGCTTAAC CGACCCGGCT AGCCCGCAGT ATGCCCAACT GTGGGCCGAA ACGTACAAAG TTGCCGGTGT TCCGTACAAT CCAACCGATC CGTTTCACCA GCGGGCGCTG GAATTAAAGT TGGGCACGCC GCTGAGCGAG GTGGTGCGTG CGACGATCCA GGGGGTGACC TATGAGGTGC AGGTGTTCGC TTACGATACT CTGTATCGTG GAGGGGATGG CGTGATCCGG TGTATGCGTG ATCTGCCACG TCCGCCAGAA GTACTGGCGT GGCAGCCGAA ACCGGCAACG TCTCCTGTGA ACGCCGGGCA TGTGGTGCAA ACGCCGGTTC AACCCTCTGC CACAGCCACC AGCCCGGCGA CGCAATCGGC GAGCGCATCA TCTCAGGTGA TAGCGGCTGA TCCTGCGTCA TCCCCATCCC AACAACCGAC CGGGGGGATG GCCAATGTGC TGACTGCGCC GGAGGTGGTG CGGGCCGGGC CGCCGCGTCG CGATCCGAAT TGGCCGCCCA TGCCCGATTT CAACATTCTG ACCGACCGCA ACGGCCAGCG CGAGCGAATC TTGGGTAAAA TCGAGTGGGT GCGCAAGAGC GGCGATGATA TTACCATCAC CAACGATTGG GTGGCGCAGA ACCTGATCGA GGTGTCGATA CCGCAATTGG TCCGGTTCCG CAATACTAAC GGCGGGCGGA TCCGTTTCCA TCGGGTGGCG GCTGACCAAT TGCGCCGGTT GTGGCAGGCA TGGGAAGATG CAGGACTCTT GCAGTTAGTG TTAACATTTG ACGGCGCATG GTGGCCGCGT ACCATTCGTA GTAATCCGAC GACGCTGAGT AACCATGCCT ATGGTACGGC GTTTGATATT AACGCGCAGT GGAATGCCTT CTATAAGCCG GCGGCGCCGG TGGGCGATCG CGGTTCGGTG CGTGAACTGG TGCCGATTGC CAATGCGCTT GGTTTTTTCT GGGGTGGTCA TTGGAATTAC GATGGCCGCG GCGCCAGTGA TGGGATGCAT TTTGAATGGG CAGTTGCCCG CTGA
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Protein sequence | MSSAEVQVIA VGRPDRAGKS REGRPVALVV AVADAQHAAM ALDAYQSADA AMLPHFYLDR DGTLHQLVAP VRAGHGLGRA IWRGRVHNLD RVAVIVSLAA PALTDLSEAQ ATVLADWLPA VAAQHGLSLA DIGMLITDAR GKRRVLPYLP LAAPVAPAEG VILGSGVRSP EQELWVGLAT VTWWQRGGQL RLNQAFSLHW GKFDLGAPLA PNEPPPVALD GKTYNFQVFA RDTIFNEGTQ YAAVQNLANL LGPDIGAIPV GGVSRALIEA SYRSALKASA ARAPLEGKTE FRADWRFHFV ALQAKLGPAL SGNYVTADRA FALQVFAGDT LYTPMSQQSG CFFLSLTDPA SPQYAQLWAE TYKVAGVPYN PTDPFHQRAL ELKLGTPLSE VVRATIQGVT YEVQVFAYDT LYRGGDGVIR CMRDLPRPPE VLAWQPKPAT SPVNAGHVVQ TPVQPSATAT SPATQSASAS SQVIAADPAS SPSQQPTGGM ANVLTAPEVV RAGPPRRDPN WPPMPDFNIL TDRNGQRERI LGKIEWVRKS GDDITITNDW VAQNLIEVSI PQLVRFRNTN GGRIRFHRVA ADQLRRLWQA WEDAGLLQLV LTFDGAWWPR TIRSNPTTLS NHAYGTAFDI NAQWNAFYKP AAPVGDRGSV RELVPIANAL GFFWGGHWNY DGRGASDGMH FEWAVAR
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