Gene Cagg_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0354 
Symbol 
ID7268455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp437439 
End bp440744 
Gene Length3306 bp 
Protein Length1101 aa 
Translation table11 
GC content58% 
IMG OID643565222 
Productacriflavin resistance protein 
Protein accessionYP_002461736 
Protein GI219847303 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00649102 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000737583 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGGCCCGC AACGTCGGGA AAAACTCAAC GGCATCTGGA TCGCTGATGT CTCGATTCGG 
CAGCCAGTCT TCATCACTAT GGTGATGCTG GCTTTCATAA CCTTTGGTAT TCTCTCATTC
CGCTCAACCC CTGTCAACCT GCTACCGGAA ATTGATGTCC CGATCGTCGC CGTCACCATC
ACCTACCCCG GTGCCGGCCC GGAAAGTGTC GTCGATCAGG TCGTGCGCCC GGTCGAGAAT
GCAGTCAATA CGCTAGCCGG TCTCAAGCAT ATCACATCAC AGGCGAGCGA AGGTATCGCG
ACCATTCTCC TCGAATTTGA AGCCGGCAAC TCGGCAAAAC AAGTCGAAGA GGATGTCCGC
CAGCGCGTAA ACAGTATTCT CCCCCAGTTA CCGCGCGATG TTCGGCAACC GATCTTCCAG
CGGTTTGACC CGAACCAAGC ACCGATTATG CAAATCGCCA TCGCCGACAC AAGTGGGCGT
TCACCACTTG AGTTGCGTAC ATTGGTGGAA GAACAACTGG TGCCGCTCAT CCAGCGTGCT
CCCGGTGTTG GTTCGGTGAC GGTGAACGGT GGACAAGAGC GCCAGATTAA CGTCTGGCTC
GATCTGGCGA AGTTGCAAGC ATACGGCTTG TTGCCGGCCC AGATCAGCCG TTCGTTGCAG
CAAGCAAACG CCGATCTTGG TCTTGGTTCG CTGATCGAGA ATGATACCGA GATCAGTTTG
CGGGTCCCCT CGTTACTGCG CAGCGTAACC GATATTGCGA ATGTGCAAAT TTCAGGAACA
CCGTATCGCG TGAGCGATGT TGCCGTCGTG AGCGAGGGGG TAGCCGAGGT AACCACCATC
TCACGGCTCA ACGGCAGCGA GGCGATTCTG CTGAGTGTGC TCAAGCAGTC AGGCGCCAAT
ACGGTAACGG TGGCCGACAA CGTTTACAAG GCGCTTGAGC AAGCTTTTGC GCCGTTTCCC
GAATTGACCT ACACCATTCC GGTTGACAGT TCGGAAGCGG TGCGTTCATC GGTTGCTTCT
TCGCTCGAAG AGCTGATCTT TGCTTCCATC GCCGCATTCC TGGTGGTCTG GTTCTTCTTC
GGCAATCTGC GCAGTACCAT CATTACGATG TCGGGGTTGC CGGTGATCTT GATCGGCACC
TTCATCTTTA TGCCGATTTT TGGCCTGACG ATTAACCTTG TCACGCTGCT TGCCCTCTCG
CTCTGCGTCG GTCTCGTCAT TGACGATGCG ATTGTGGTGC GCGAAAACAT CTTCCGTCAC
CTCGAACGTG GCGAAAGTGC GCGGGTTGCG TCATCGCGTG GAACGTGGGA AGTCGGCTTG
TCGGTGGTGG CGATGACGCT GACGATTGTA GCCGTCTTTG TACCGGTGAC GTTCGCCGAA
GGGGTCGCCG GGATCGTGTT CAAATCGTTT GGGTTAGTCG TCTCAATCGC GATCTTGCTC
TCGTTGGCCG AAGCGTTTAC CTTCGCACCG ATGTTATCGG CCAACCTCTT CCCCAATATC
AAGCTCAAAC CGAAGCCGCA CCATTCCGAT CACCGGCCGA TTGTCGAGAT ACCGATCTCG
GATGAGGTGA GCGAGCGCGA TATTGGTCTC TTGCAAGAGG CCAATGAAGA CCCCGGGCGG
ATGGGGCGAT GGTACGGCAA GCTGCTCGGA TGGACGTTGG CGAGCCTCCG CAACCGGTTA
ATTGTGGTCG GCATTGCACT GGCCGTCCTT GGGTTGAGCG TGTGGGTGGC GAGTGGGTTG
AAGTTAACCT TCTTCCCTGA GCAGGATCCG CACGAGTTTA TTATGCGCTT CGAGGCAGCC
CCGGGAACGC CTTTGGCCGA AACCGACCGG CTGGCCCGCC AGGCTGAGCA GATCTTGCTG
AACGATCCTG CGATTGAAAA TGTGATTACG CGGGTTGGCT CCCCCGGTTT CCCAGAGCGG
GCCGAGTTCT CGGTGACGTT GGTCGGGCGT ACACCAACAC TACCCACCCA AGAGCGCCTA
CGTGAGCAGT TGAGCTTCTT ACCACGCCTG AGCTTCTCGG TACCAAGTTT CCAGCCCTCA
GGCGCTGGTG TGGAAGGACG TGAATTGCAA GTCAGTTTGC AAACGACTCG TCCCGCTACC
GAACTCGCGC CGCTGGTCGA AGCGATCAAG CGTGAGATGG CGGCAGTGCC GGGATTGGTC
GACATCGACA GCAACCTCCA ACTGGGCAAA CCGGAATTAC GCCTCCGCGC CGATCCGGCC
CGCATCGGTG AATTAGGCAT TACTAACGAA GACATTGCTT CCTCGGTCCG CGCATTGATC
AACGGCGAGC GGGCGACAGT GCTCCGCACC GGTAACACCG ATCTCGACGT GGTGGTGCGA
CTGGCTCCGC AAGATCGAGC CGGCGTCGAA ACGCTCGGTG CGATCAGTAT TCCTACACGA
AGCGGTGTGG TGCCACTGAG CGCACTGGGC ACGGTGGAAC TGACCTCCAG CCAGGTCTCG
ATCCGTCGCT ACGACCGACT CAATCAGGTA CTTGTCGGCG CCAACCTTGA GGGTGTCAAT
CTGTCGGACG CGCAGGCAGC CGTACAAGCG CGGCTGGCGA CGCTGGACAT TCCGGCTGAT
GTGGTGGTTA GCTACGTCGG TACGATTGCC CAGACCAATG AAGGCTTCTC GTCGCTCTTC
CTCGCCATGG GCTTATCGGT GCTCTTCGTC TATATGGTGC TGGCCTCGCA GTTTGGCAGT
TTCACCCAGC CTCTGGTGAT TATGATGGCG ATGCCGTTCA GCTTCATCGG CGCATTCCTC
GCGCTGCGCT TAGTAGGCAT TGACCTCGAC ATCACCGGCA TGATCGGTCT GATCATGCTG
CTCGGCTTGG TGGTGAAGAA CTCGATCTTG TTAGTCGATT TCACCAACCG ACTGCGTGAT
CTGGGCCTTG ACAAGCACTC GGCGCTGAAA TTGGCCGGCG CGATCCGGTT ACGTCCGATC
TTGATGACGG CGCTCTCACT GGTGGCAGGG GCAATGCCGA CAGCGCTCGG CCTCCACGTC
TTGGCAACCG GTGAGGGGAA CGAATTTCGC AAAGGGCTTG CATGGGTACT GATCGGTGGT
ATGCTTACGT CAACCTTACT CACGTTGCTG GTCGTACCAA CAGTGTATAG CCTGATGGAC
GCAGCGGTGA CGTGGCTGAA GCAGCGGTTT AGCGGTATGC AACCGCACGA GGGCTTTGAA
CTTCCCGCTC CCGGACCCGG AGCAACCGCT GCAACGACAT CAGGCGCGGC TACCTCGTCT
GTCACCCGAC CGGCGGTACC GCCGACCACA CCGGCTGCAC CGGCTGGCGA GCCTTCGGCA
GATTAG
 
Protein sequence
MGPQRREKLN GIWIADVSIR QPVFITMVML AFITFGILSF RSTPVNLLPE IDVPIVAVTI 
TYPGAGPESV VDQVVRPVEN AVNTLAGLKH ITSQASEGIA TILLEFEAGN SAKQVEEDVR
QRVNSILPQL PRDVRQPIFQ RFDPNQAPIM QIAIADTSGR SPLELRTLVE EQLVPLIQRA
PGVGSVTVNG GQERQINVWL DLAKLQAYGL LPAQISRSLQ QANADLGLGS LIENDTEISL
RVPSLLRSVT DIANVQISGT PYRVSDVAVV SEGVAEVTTI SRLNGSEAIL LSVLKQSGAN
TVTVADNVYK ALEQAFAPFP ELTYTIPVDS SEAVRSSVAS SLEELIFASI AAFLVVWFFF
GNLRSTIITM SGLPVILIGT FIFMPIFGLT INLVTLLALS LCVGLVIDDA IVVRENIFRH
LERGESARVA SSRGTWEVGL SVVAMTLTIV AVFVPVTFAE GVAGIVFKSF GLVVSIAILL
SLAEAFTFAP MLSANLFPNI KLKPKPHHSD HRPIVEIPIS DEVSERDIGL LQEANEDPGR
MGRWYGKLLG WTLASLRNRL IVVGIALAVL GLSVWVASGL KLTFFPEQDP HEFIMRFEAA
PGTPLAETDR LARQAEQILL NDPAIENVIT RVGSPGFPER AEFSVTLVGR TPTLPTQERL
REQLSFLPRL SFSVPSFQPS GAGVEGRELQ VSLQTTRPAT ELAPLVEAIK REMAAVPGLV
DIDSNLQLGK PELRLRADPA RIGELGITNE DIASSVRALI NGERATVLRT GNTDLDVVVR
LAPQDRAGVE TLGAISIPTR SGVVPLSALG TVELTSSQVS IRRYDRLNQV LVGANLEGVN
LSDAQAAVQA RLATLDIPAD VVVSYVGTIA QTNEGFSSLF LAMGLSVLFV YMVLASQFGS
FTQPLVIMMA MPFSFIGAFL ALRLVGIDLD ITGMIGLIML LGLVVKNSIL LVDFTNRLRD
LGLDKHSALK LAGAIRLRPI LMTALSLVAG AMPTALGLHV LATGEGNEFR KGLAWVLIGG
MLTSTLLTLL VVPTVYSLMD AAVTWLKQRF SGMQPHEGFE LPAPGPGATA ATTSGAATSS
VTRPAVPPTT PAAPAGEPSA D