Gene Cagg_0283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0283 
Symbol 
ID7267464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp354732 
End bp355184 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content55% 
IMG OID643565153 
ProductNusB antitermination factor 
Protein accessionYP_002461667 
Protein GI219847234 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.102265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAGGG TACGCTTGGC AAGTCAGCGG CATCGCGTGC GGATCGCAGC GCTACAGATC 
CTGTTCGAGG TCGACGAAAC CGATCACGCA ATCGATCAGG TACTCGAACG CCGACTTACC
GATGAACCCA TGTCGGCTGA AAGCGCTGAG TTTTTGCGTC GCCTGGTGTT CGGTACTTGG
GAACATCGGT CGTACCTCGA CCGGATTATC GAGGAAGCAG CTCCAAACTG GCCGGTCAAC
CAAATGCCCG GTGTCGATAA GGCAGTACTG CGGATCGCAC TGTTTGAGCT GTTGATCGAT
GAGGTAGAGA AGACGCCGAT TAAGGCGGTG ATTAACGAAG CGGTCGAACT GGCAAAAGAG
TTCGGCAGCG ATAACTCTAG TCGATTTGTG AATGGCGTGC TCGGTACGGT AGTGACGCGC
TACCTTGCCG AGCGCGAGGC AAATGAGGAA TAG
 
Protein sequence
MGRVRLASQR HRVRIAALQI LFEVDETDHA IDQVLERRLT DEPMSAESAE FLRRLVFGTW 
EHRSYLDRII EEAAPNWPVN QMPGVDKAVL RIALFELLID EVEKTPIKAV INEAVELAKE
FGSDNSSRFV NGVLGTVVTR YLAEREANEE