Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1659 |
Symbol | |
ID | 3747677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2158016 |
End bp | 2158762 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637774197 |
Product | ribonuclease III |
Protein accession | YP_379954 |
Protein GI | 78189616 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCACCCG AAACGCTTGC TTATTTGCAA ACACTTATTG GCTCGCTTGA TGGCAATGCG CGGCTTTATC AAACGGCGTT AACCCATCGT TCGGTTATTG GTAATACAGC GTTGTCGCAT CATAATGAAT CAAATCAGCG TCTTGAGTTT CTTGGTGATG CGGTGCTTGG GCTTCTTATT TCTCACTTCC TTTTTCAAAA CTTTCCTGCA AGCGCCGAAG GCGATCTCTC AAAAACTCGC GCCAAAATTG TTAATAGTAA GTCGTTAGCC TGTTTTGCTC GTTCCATTGG TTTGGGGGAA CATTTATTGC TCGGTGAATC GGCGGCTCAT TACAACATTC GTGATAGTGA ATCGGCGCTT GCCGATGCCT TTGAATCGCT GATTGGTGCT ATCTACCTTG ATAAAGGGTT AGATGCAGCC TACGGTTTTG TTGATAAACA TATTATCCAT CACCAGAGTT TTAGCGCCAT TGTTGCAAGT GAGCAGAATT ATAAAAGTTG CTTAATTGAA TATTCGCAAG CGCACCATGT AGCCGCACCT GTTTATACGG TTATTGCAGA GCATGGCGCT GAGCACGACA AAGAGTTTAC GGTTGAAGTA AGTTGCAACA ACATTAAAGG GTGTGGTACG GCACGCCGTA AAAAAGATGC CGAGCAATTA GCGGCTAAAG AGGCTATGGA GCGCATTATA GCGTTGCAGC CATTACCTCA TGAACCAAAA GATGAAGAGA ACAGCACGAC AACATGA
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Protein sequence | MPPETLAYLQ TLIGSLDGNA RLYQTALTHR SVIGNTALSH HNESNQRLEF LGDAVLGLLI SHFLFQNFPA SAEGDLSKTR AKIVNSKSLA CFARSIGLGE HLLLGESAAH YNIRDSESAL ADAFESLIGA IYLDKGLDAA YGFVDKHIIH HQSFSAIVAS EQNYKSCLIE YSQAHHVAAP VYTVIAEHGA EHDKEFTVEV SCNNIKGCGT ARRKKDAEQL AAKEAMERII ALQPLPHEPK DEENSTTT
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