| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1598 |
|---|
| Symbol | |
|---|
| ID | 3746673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 2087595 |
|---|
| End bp | 2089529 |
|---|
| Gene Length | 1935 bp |
|---|
| Protein Length | 644 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637774138 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_379896 |
|---|
| Protein GI | 78189558 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5635] Predicted NTPase (NACHT family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTCC CAGCCTCTTG CATGGCTTTG CCGACAGCAT CATCCTTGAT GCCGCATGTG
CAACAAGCTG AATTAAGCTC GTGGATTTTT TACGCCCCTC TTGTAGCGCC TGTTATGGCA
TTGGCGGTTA ATGTTGCGTT GCCTTTTTAT CAACGTGCAA AGCGTCGGCG GAGTATTGCT
AAGCAGCGGG CGGCGCGTCG TGAGCGTTTT GGGCTTGCTA CAGAGAATAG TGCGGTGCGT
GGGCGCGTTA AGCATCCCGA TAATTATTAT CGTCAATGGC TTGCGCGTTG GTGCCAGCAG
CAGCAAGGGG CGTTGTTGCC CGGTGGGGTG GCGTTTGAGA GTATGGATTT TACTGATCTT
TTTGTGCTGC CCGATGTGCT GTTGCAAGGT TCAACTCCAA CGGAACAAGG TGGAGCCGTA
TCGTTTGACA CGGCACTCTC TTTTGCGGCG GAGTCGTCGC GTTTGTTGTT GCTGATAGGC
GAAGATGGTG GTGGTAAAAG TGCGCTTATG CAGTCGTTAG TGCTTGGCAA TAAACCGCGT
TTATCGGGTT TTTCCGATAA GTCTCAAATC TTTTTTTTGC CACTGACAGC TTTAGCGGCA
ATTCCAACGC CATTTCCAGC ATTGCCTGAT GTGTTGCGGG AGTGGAGTGG TTTGCAGGAG
CAACTGAGTA CTTCGTTTTT CCATTCGCAT CTTACCACGC ATCGAACATT GGTGTTGCTT
GATGGACTTG ATGCTTTGCA CAATCCTGAG CAGCGTGAAG CGGTGTGCCG CTGGATTGCT
GAGGCTGTGG GGGAGTGGCA GAAAGCCTTT TTTGTGCTAA CCACCTCTCC CGATACTTTT
GGTGAGCGGG AGCAAGCAGC ATTGGCGTGC CATACGCGCA TTGCGGTGTT GAAGCAGTTT
AATAATCAGC AACAGCATCT TTTTTTTCGC CAATGGTTTC GAGCATTGCG CTTGCGTGAA
CTGTGCCGTG AACATGGTGA TGTTGCCGAG TGCTCTTTAA CCACCATTGA GCGCCATGAG
TTAGAGGCGG AGGTGTGTGC TGATGCGCTT GAGTACTCTT TGCAAAAGGT GGAGCCAACG
CTTATGCGCG AAGTTGCTGC AACGCCATTG TTGCTTGGTA TTCTTGCTCG TTTTTGGGAA
GAGCACCATT ATGTGCCAAC CACGCGTGAA GCGCTTTATG ATGCAGCACT TACCTATTTA
TTGAAGGATG CAGTGCAGCA GCCTGATTGT TTGCACCTTT TGCCTCCTAT AGCGGAGCTT
AAACATTTAC TGGGTTCTTT AGCGCTGTGG ATGCAAGATA GCGGGGTGAT TGCGGCACCT
GTGGAGCAGG TTCATGCTTG GCTTCAGCCT GAAGTTGAGC GGCTTAATGC GCGTTTTGGT
GATGCTTATC GGGTGGATGC TCTTTGTACG CATTTGGCGG CAGGAGGTAG TGTGCTCGGT
CAGCAAGGGG GAGCTTATTT ATTTACGCAT AATAGCTTTC GTGATTATTT AATTGGTGAA
CAGCTTTTAA AAGAGGTAGG GGTAGAACCA ACCCGTGCAG CTAAAATGGC TGTGCAGCTT
GGTGATGGTT GGTGGGATGA AGCCTTTCTC TTTTTTGCAA TTCGTGCTGA AGGGCTGTGG
TTTACGCGCT TTTTAAAAGC GCTTATGGAA TCGCCACAGA GTGAATTGTT GGATGAGGCG
GCGCGTGGGT TGCTGTTGCG CATGGTGGAG CGTGCCGATC CACCTGTAAC TTATTTGCGT
GATAAGCTGC GCGATCGGCG CACCAATCGA GTACGGCAGC TTTTATTGTT GGAGTGTTTA
CAAGTGGTTG GTAGTGTGCA AGCCTATCAA GCAGCGCAAG AGTTTATTCG CCACCACCGT
CGTGCCGATA GCGAGGTGCT CCGTAAAGCG GCAGAGGTAG TGATTCGCCA AACGTCTCAT
CGCAAAATCC ATTAA
|
|---|
| Protein sequence | MLLPASCMAL PTASSLMPHV QQAELSSWIF YAPLVAPVMA LAVNVALPFY QRAKRRRSIA
KQRAARRERF GLATENSAVR GRVKHPDNYY RQWLARWCQQ QQGALLPGGV AFESMDFTDL
FVLPDVLLQG STPTEQGGAV SFDTALSFAA ESSRLLLLIG EDGGGKSALM QSLVLGNKPR
LSGFSDKSQI FFLPLTALAA IPTPFPALPD VLREWSGLQE QLSTSFFHSH LTTHRTLVLL
DGLDALHNPE QREAVCRWIA EAVGEWQKAF FVLTTSPDTF GEREQAALAC HTRIAVLKQF
NNQQQHLFFR QWFRALRLRE LCREHGDVAE CSLTTIERHE LEAEVCADAL EYSLQKVEPT
LMREVAATPL LLGILARFWE EHHYVPTTRE ALYDAALTYL LKDAVQQPDC LHLLPPIAEL
KHLLGSLALW MQDSGVIAAP VEQVHAWLQP EVERLNARFG DAYRVDALCT HLAAGGSVLG
QQGGAYLFTH NSFRDYLIGE QLLKEVGVEP TRAAKMAVQL GDGWWDEAFL FFAIRAEGLW
FTRFLKALME SPQSELLDEA ARGLLLRMVE RADPPVTYLR DKLRDRRTNR VRQLLLLECL
QVVGSVQAYQ AAQEFIRHHR RADSEVLRKA AEVVIRQTSH RKIH
|
|---|
| |