Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1448 |
Symbol | |
ID | 3746646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1915969 |
End bp | 1916514 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637773982 |
Product | outer membrane protein OmpH |
Protein accession | YP_379747 |
Protein GI | 78189409 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTT CTTCATTTTT TGCCGTTTCG CGCCGCATTG CAACAGGCGT TATGTTAAGC CTTACCCTTG CTGCGCCACA AGCTTTTGCA GCCCAAGAGA GCGGTAAAAT TGGCGTTATT GATTCCGCCA AAATTCTCCA GCAACTTGCC GACACCAAGC AAGCCGAAAG TGCCTTGCAA GCAGCAGCAG CTCCCATGCA AAAAGAGTTA GACCGCATGA ATCAAGATTA TCAACAAGCT GTAGCTGCAT ATCGCCAAAA AGCTGCGACA CTTGCAAAAA CAGCACGCGA ACAAAAAGAA AAAGAGCTTA CCACAAAAGG CAAAGCGATT GAAAAATATC AGCAAGACAA CTTTGGACGT GGTGGCGCTC TTGAAAAAAA GCAACAAGAG CTTTTTAGCC CCGTCCGCCA AAAAGTGCTA ACAGCCGTTG AAGCTATTGC TCAAAAAGAG GGAATTTCTG TAGTGGTTGA AAAAAACAGT GCCATTTACG CTACTACTGA TGCCGATATT ACCTACAAAG TGCTCAACCA ACTGAACGTT AAGTAA
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Protein sequence | MKTSSFFAVS RRIATGVMLS LTLAAPQAFA AQESGKIGVI DSAKILQQLA DTKQAESALQ AAAAPMQKEL DRMNQDYQQA VAAYRQKAAT LAKTAREQKE KELTTKGKAI EKYQQDNFGR GGALEKKQQE LFSPVRQKVL TAVEAIAQKE GISVVVEKNS AIYATTDADI TYKVLNQLNV K
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