Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1399 |
Symbol | |
ID | 3746583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1862226 |
End bp | 1863533 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637773935 |
Product | hypothetical protein |
Protein accession | YP_379700 |
Protein GI | 78189362 |
COG category | [S] Function unknown |
COG ID | [COG1808] Predicted membrane protein |
TIGRFAM ID | [TIGR00271] uncharacterized hydrophobic domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.465928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAAA TGACAAATAT TTTTAACATT AAATCCGATT GTGAATCGTT TGATACTATT TATAAAACAG TAAACCTCGA TTCTACTTTT AATGGAAGCC GATTATCAAT TTTAATTTGT GCTATTATCT TAGCTTCCGT TGGGCTTAAT ATGAATTCTA CTGCCGTCAT TATTGGTGCT ATGCTTATTT CTCCATTAAT GGGACCAATT AACGGTATTG GCTATAGCAT TGCAACCTAT GACTTTTTGC TCCTTCGTAA AGCCATTAAA AACCTTTTAT TTGCCATCAT TGCAAGCCTT ATCACTTCAT CTCTTTATTT CGCTGTCAGT CCTGTTTCAA CAGCCCACTC AGAATTACTT GCACGCACCA GTCCTACTAT TTATGATGTA CTAATAGCTC TATTTGGCGG TTTTGCTGGT ACTATTTCGC TTGTTACAAA ATTAAAAGGA AACGTTGTGC CTGGCGTTGC AATTGCAACA GCTTTAATGC CACCTCTTTG TACTGCTGGT TATGGATTAG CTACTTTTCA ATTTTCATTC TTTTTTGGGG CGCTCTATCT TTTTACTATT AATCTTGTTT TTATTGCATT AGCGACCATA TTATTTTCAC AACTTATTCC ATTTCCACTG AAAAACATTA TTAATGATGA TAAAAAGAAA AAAATAAATA ATTTTATTAC CTCTATAACA TTAATAACTT TGGTTCCAAG TATTTATTTT GGTTATGTTC TTTCTGAAAA AGAAAAATTT AATGAAAACG CAAAAAGATT TATACAAAGC GTTACTTTTT TTGATGGTGA ATACCTTCTG CATCACGAAA TAAATGCAGG AAACCGCTTG ATTACACTTA TTTATAATGG GCAGGGTCTT ACAGAAAAGG AAAAAGCCGA GCTTCAAAAA AGAGCTAATG ATTTTGGATT AAAAAATACA ACCTTAACAT TTCAACAAGG AATTAAATTT AGTCCAATAT CAAAAGAGAA AAGTGAGAAT GAAGCATTAA AAACAGAAAT CAATCGCCTT GCTATTGCTC TAAAACAGCA AACAACAAAA CAAGATAGCT TACAAAAACA AATATATCGC GGTTCCATTT TTTTGCGTGA GCTACAACCA CTATTTCCTC AAGTAACAAC ATGTGCTTTT ATGGAGTCAT ATCGCTTTAG CAACAAGAGT AACACCTTGC CCGTTAAAAC AGCATATGTT GTTATTACCA CAAACAATTC TTCTCTCAAA AAAACTGATA AAGAAAAAAT TACAATGTGG TTACAAGCTC GCACACAAAA CGATTCACTT CGTGTTATTT TCGAATAA
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Protein sequence | MSKMTNIFNI KSDCESFDTI YKTVNLDSTF NGSRLSILIC AIILASVGLN MNSTAVIIGA MLISPLMGPI NGIGYSIATY DFLLLRKAIK NLLFAIIASL ITSSLYFAVS PVSTAHSELL ARTSPTIYDV LIALFGGFAG TISLVTKLKG NVVPGVAIAT ALMPPLCTAG YGLATFQFSF FFGALYLFTI NLVFIALATI LFSQLIPFPL KNIINDDKKK KINNFITSIT LITLVPSIYF GYVLSEKEKF NENAKRFIQS VTFFDGEYLL HHEINAGNRL ITLIYNGQGL TEKEKAELQK RANDFGLKNT TLTFQQGIKF SPISKEKSEN EALKTEINRL AIALKQQTTK QDSLQKQIYR GSIFLRELQP LFPQVTTCAF MESYRFSNKS NTLPVKTAYV VITTNNSSLK KTDKEKITMW LQARTQNDSL RVIFE
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