Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0986 |
Symbol | |
ID | 3746911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1330600 |
End bp | 1332054 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637773516 |
Product | outer membrane efflux protein, putative |
Protein accession | YP_379292 |
Protein GI | 78188954 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATT TACGAACATG GATAAATCAG AGAAAAAGAA CGTTTTACAA TATTTCATCT ACCTTAGCAT TCCTCCTCAC TCCCCTTCCC GCCCTCACCC TCATGGCGGT ATCACTGCAA GTTTATGCGG GTGAAAATGC TACGCCTACA CGCTTAACGT TGGAGCAGTG CATTACCATT GCGTTGGAAC GAGCAACACC ATTAAAAAAA GCTGACAACA ACCTCACGCT GCAAGGCACT GATGTATTGC AACGTTACGG CAGCTTTTTA CCTCGCTTAA CGCTTTCAGC AGGTTATACG CCCGTGCAGC AACAAAAAAG CTACACCACG CTTTCGGGCA CTATGCCACC AACACTTCTT ACTACCGAAA GCGATGCGCT CTCCATGCAA CTAACAACCT CGCTTAACCT CTTTAACGGT TTTGGTGATA TGGCGGCGTT GCAAGCGGGA CTGAATCGGC GTGATGCTGC CCGCTTGAGC GTTGCTCGTG CTCGCGAAAC CGTTGTGTAT GATGTTACGC AAGCCTATTA CCAAGCGTTG TTGGATCGTG AATTGTTGCT TATTGCGCGT GAAAATTTGC AAGCCTCGCG CGATCAACTC ACTTTAACGG AGCGGCAATA TCAAGCGGGT TTAAAGTCGT TGATTGATCG TGAGCAGCAA GCGGCTGAAA CGGCGGATAG CCAATTGCGT GTTATGAAAG CTGAAAGCCG TGCTGAGCAA AGTTTGCTGG AGCTTCTCCG ACGACTGCAA TTAGATCCCT TAACCTCGTT AGAATTGCAA ACCGCTGCCG ATGTGGTAAA TGGTGATGCT CCCTACACGT TGGCGGCTGA TGAGCTGATT GCGCGTGCCC GTGAACAGCG TAACGATCTT AAAAGCCAGC AAGCCCAAAG CAAAGCAAAC CGTTGGCAGG AGCGCGAAGC GGCGGCACAG CGTTATCCAT CGCTCGACTT GAATTTGACG GCTTCCACTT CAGCTACAGG CGATGTGGAG CAACGCATTG CTGGTATTGA AAAAAAGTAT AGCTATCCTC CGCTGAGCGA TCAACTTGGC AATGCCACAA GCTACAGTGT AACGCTCAGC ATGAATTGGG TGCTTTTTGA TGGATTTCGT AGCCGTTATA GCTTGCAATC CGCCCATCTT AACTATCTTA ATCAACAACT TGATGTAGAG GATGCAAAGC GCAATCTTGC AATTGATGTT CGTAAAGCCA TTGCCGAATA CGATGCGGCT CGTCAGCAAA TAAGTGCGGC ACGGGTAAGT TTGCAAGCGG CAAGTGCAGC ATTTAACGGC ATTAAGCGTA AATATGAGCT TGGCGCTGCT ACTTTTGTGG AATTGAGCAG TGCGCGTGCA GCGCTTTTTA ATGCACGCTC TTCGCTGTCG CAAGCCACTT ATTCGCTTGC CTTGCAAAAA AATATTCTTG ACTATGTAAG CGGAAGCACA AGTTTCTCTA AATAG
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Protein sequence | MKHLRTWINQ RKRTFYNISS TLAFLLTPLP ALTLMAVSLQ VYAGENATPT RLTLEQCITI ALERATPLKK ADNNLTLQGT DVLQRYGSFL PRLTLSAGYT PVQQQKSYTT LSGTMPPTLL TTESDALSMQ LTTSLNLFNG FGDMAALQAG LNRRDAARLS VARARETVVY DVTQAYYQAL LDRELLLIAR ENLQASRDQL TLTERQYQAG LKSLIDREQQ AAETADSQLR VMKAESRAEQ SLLELLRRLQ LDPLTSLELQ TAADVVNGDA PYTLAADELI ARAREQRNDL KSQQAQSKAN RWQEREAAAQ RYPSLDLNLT ASTSATGDVE QRIAGIEKKY SYPPLSDQLG NATSYSVTLS MNWVLFDGFR SRYSLQSAHL NYLNQQLDVE DAKRNLAIDV RKAIAEYDAA RQQISAARVS LQAASAAFNG IKRKYELGAA TFVELSSARA ALFNARSSLS QATYSLALQK NILDYVSGST SFSK
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