Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0816 |
Symbol | |
ID | 3746815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1142602 |
End bp | 1143255 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637773346 |
Product | thiamine monophosphate synthase |
Protein accession | YP_379125 |
Protein GI | 78188787 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.380112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAATC CAATACTTCC GCCACTCCGC CACATCCCCA CATCACCTTT TTTGTGCGCT CTTACCGATG CAACCCTTCC ACCTCTTCCA TTTGTAAAAG CTGTGCTTGC GGGTGGCGCC ACCATGATTC AGCTTCGCGT TAAAGAGGCG ACAACTCGTG AGCTGATTGC TTGGGGAGTG GAAATTCGCA CACTTTGCCA TGCCGCAGGC GCTTGCTTTA TAGTAAATGA TCGGGTGGAT GTTGCCTTAG CGTGTGGTGC CGATGGGGTG CATCTTGGGC AGCAGGATAT GCCGTGCAGC CTTGCACGCA AGCTTTTTGG TAAGGATATG CTGATTGGCG TTTCGGCTTC AACGGTGGCT GAGGCACTGC AAGCCGAACA AGATGGGGCT GATTATATTG GTTTTGGGCA TATCTATCCC ACTAATTCAA AAGAGAAGCC ACATTCACCG GTTGGGCTTA GCACACTTCA GCAGGTTGCA AAAGCTATCT CGCTGCCCAT TGTGGCTATT GGGGGAATTT CTGGGGAAAA TGCTTCGGCA GTCATTGCGG CTGGTGCCTC AGGTATTGCG GTTATTGCGG CTTTGAGCAA AGTGGAAAAT CCCACGGTAG CCGCCACAAA GCTCTGTGCC GCCATGCAAG GAGTTGCCTT ATGA
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Protein sequence | MINPILPPLR HIPTSPFLCA LTDATLPPLP FVKAVLAGGA TMIQLRVKEA TTRELIAWGV EIRTLCHAAG ACFIVNDRVD VALACGADGV HLGQQDMPCS LARKLFGKDM LIGVSASTVA EALQAEQDGA DYIGFGHIYP TNSKEKPHSP VGLSTLQQVA KAISLPIVAI GGISGENASA VIAAGASGIA VIAALSKVEN PTVAATKLCA AMQGVAL
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