Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0042 |
Symbol | |
ID | 3747241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 47090 |
End bp | 48994 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637772568 |
Product | hypothetical protein |
Protein accession | YP_378364 |
Protein GI | 78188026 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.581488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTACAAA AACTCATTAT TAAACGATTT CGAGGCTTTA GCACTCTTGA GGTAGATATC CCCAAAGTGT TGCTTCTAAT GGGACCGAAT AGCTCTGGGA AAACTACAGC CCTTCATGCT ATACGTATTT CATGCCAAGC GGCTTGGATT GCTGTAACAA ATAACATAGC GTGGAAAGTT GAAGATACTG TTATTATTTT TAAAGATTTT ATTATTCGAG ATATATCGCA ACTGATGCCA ATTGCTGATT GGCAAGCACT TTTTGTTAAT CAAATTGTTG GTGAACATAC ACATTTTAGC ATAGAAATTA TCTTTGAAAA AACGGATGCT CTATCATCTA TCTTAATAGA AGGGAAATAT GCGCGAAATG AAAACCTTAA AATAACAGCA ACTATTGGCG CAGAAACACT CATTAATAAC CTCAAAAACA TATCAAATCG TTCATCACAA TATAAAAACA TAGCTTTTGA ATTTTTTCAA AAACATCTAC CTAAAGCAAT TCTTATCCCT CCCTTTTATG GGGTAATTAG AGATGAAGAG TATCGCGCAA AAGCAGTTGT TGATGCTATG GTTGGCTCTG CTGATCAAAG TCATGTTGTA CGCAACATGA TTTCACGCTT ATCAACAACG CAATTAGAGC AACTGAATGC TTTTATAAAA GATATGGTTG GAGCTACATT AGTACAACGT ACTCAAGGCG ATGATATAGA GAAAATATCT CCGTTACGAG TAACATTTCG CGATACAAAT GGTGAACTTG AACTTTCTGC GGCAGGGGCT GGTCTTATTA ATCTTATAGC TCTTTATTCA TCACTTGCTC GATGGGAATC AGAAACTATA GACCGACAAA TTATTTTTCT TCTTGATGAA CCCGAAGCAC ATTTACATCC TCGCTTACAG GGTTATACTG CTGATAGATT AGCAACCATT ATAACGAATG ATTTTAATGC TCAACTTATT ATGGCAACCC ACTCTATTGA GATTATCAAT AAAATTGGGG AGCGAGATGA TGCTACAATT TTTAGAACAG ATCGTTTAAA CAAAGAAAAA GGTGGGCAAC AACTCATAGG ACAAACCCCA CTACTTGATG ATCTTTCGCA ATGGGCAGAT TTAACGCCAT TCTCTATTAT TAACTTTTTA GCATCAAAAA GAATCCTTTT TTATGAGGGA AAATCGGATG GCATAATTTT AACAAAATGC GCAGAAATTC TTTTCCGAAA TAATCCTGAT AAAAAGAAAA AATTTGAAAA ATGGACATTA ATTCAACTCG AAGGATCGGG CAATAAAAAT ATTGCTCAAC TGTTGGCTCA TCTTATTGAT TCCAGCACGT TTGCAAGTGT AGCAGAAAAA AAAGATTTCA AAATTGTTGT ACAACTTGAT AAAGATTATA ACGATGAAGT AGAGCAACTA AAGTTAATCA CGAATCGCGA TATTTCAACA TTTTACAATA TATGGTCGAA GCATAGTATT GAGTCCTTGT TTTGTGAAAG CGCCACACTC TATCAATGGT TAAAACCAAA ATATCCTGAC ATTCAGGAAG AGACAATAGA GAAAGCAATT ATAGCCGCCA ATCAAGATAA TGAGCTGAAC CAATATGCCC GTGAGCAACG TCAAGCAACT TTATTAAAGC CGCTACAAAA AATATCAGAA AATATAACGG CAACAAATAG GCAAGCCGAT AATGATATAG CCGCTACTCC CGAAATATGG CAGCGAGGAA AAGATCGATC CAAGGTCATA TTACACCATA TAAAAACAGC TCTTAGCACA TCGGCAAATT CTCTCAGCAC ATCACTTACT AAAGTAATTG AAAAAGCCGA TGTGAATCTC TTTCCAGCGG GAAATAGGGC AGTAGTTCCC TCAGAAATTA AGCAGCTTCT GGATTGGATG GTTACAAACG CATAG
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Protein sequence | MLQKLIIKRF RGFSTLEVDI PKVLLLMGPN SSGKTTALHA IRISCQAAWI AVTNNIAWKV EDTVIIFKDF IIRDISQLMP IADWQALFVN QIVGEHTHFS IEIIFEKTDA LSSILIEGKY ARNENLKITA TIGAETLINN LKNISNRSSQ YKNIAFEFFQ KHLPKAILIP PFYGVIRDEE YRAKAVVDAM VGSADQSHVV RNMISRLSTT QLEQLNAFIK DMVGATLVQR TQGDDIEKIS PLRVTFRDTN GELELSAAGA GLINLIALYS SLARWESETI DRQIIFLLDE PEAHLHPRLQ GYTADRLATI ITNDFNAQLI MATHSIEIIN KIGERDDATI FRTDRLNKEK GGQQLIGQTP LLDDLSQWAD LTPFSIINFL ASKRILFYEG KSDGIILTKC AEILFRNNPD KKKKFEKWTL IQLEGSGNKN IAQLLAHLID SSTFASVAEK KDFKIVVQLD KDYNDEVEQL KLITNRDIST FYNIWSKHSI ESLFCESATL YQWLKPKYPD IQEETIEKAI IAANQDNELN QYAREQRQAT LLKPLQKISE NITATNRQAD NDIAATPEIW QRGKDRSKVI LHHIKTALST SANSLSTSLT KVIEKADVNL FPAGNRAVVP SEIKQLLDWM VTNA
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