Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_9048 |
Symbol | |
ID | 8340443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10460685 |
End bp | 10461632 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644962140 |
Product | D-alanine/D-alanine ligase |
Protein accession | YP_003119702 |
Protein GI | 256398138 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.499515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.480227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC TGGGCCGTGT CGTCGTCTTG GCCGGCGGCC TCAGCCATGA GCGCGACGTC TCGATCCGTT CCGGGCGCCG CGTGGCCGAC GCGCTGCGCA GTGCGGGGGT CGAGGTACAG GTCCGCGACA TCGACGCCGC GCTCCTGCCG TCGCTGCTCG CCGACCGCCC CGATGCGGTG TTCCCCACCC TTCACGGCGC CACCGGTGAA GACGGTGCGG TGCAGGGAAT CCTGGCGCTG CTGGGTGTCC CCTACGTCGG CTCGTCGGCA GCCGCCTGCC GCCGCGCCTT CGACAAGCCT TCGGCCAAGG ACGCGATCCG CACGGCCGGA CTCGCAACTC CCGACTGGGT CGCGATCCCC AAGACGACGT TCCGAGACCT CGGCACGCAC GCAGTCCTGG ATGCCGTGTC CGCCGCGCTG CCGATGCCGC TGTTCGTGAA GCCCGCTCGC GGCGGCTCCT CTCTCGGCGC CGCCGCCGTG CACACCCGCG AGGACCTGCC CTCCGCGATG GTCGCCTGCT TCGCCTACGA CGAGACGGCA CTCATCGAGC GGCACATCAC CGGGCGCGAG ATCGCCGTCT CGGTCGTCGA CACCGGCACA GGTCCGCAGG CACTGCCCGC CGTCGAAATC GTCGCGGACT CCGGCGTCTA CGACTACGCC GCCCGCTACA CCGCAGGCAT CACCGAGTTC TTCGCCCCAG CCCGGCTCAC CGCCGAGGAG GCGAAGTCGG TCGAGCAGCT GGCTGTGCGC GCCCACACCA CCCTCGACTT GTCCTGCGTG TCCCGCACCG ACCTGATCCT CGACGCCGAC GGCATCCCCT GGTTCCTGGA AGTGAACGTG GCACCGGGTC TCACCGAGAC CAGCCTGCTC CCGCTCGCCG CCGGTGCGGC CGACCTCGAC CTCGGCGTGC TCTACCGCGA TCTGGTCCAG GCGGTCATCG CCGAGTAG
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Protein sequence | MSDLGRVVVL AGGLSHERDV SIRSGRRVAD ALRSAGVEVQ VRDIDAALLP SLLADRPDAV FPTLHGATGE DGAVQGILAL LGVPYVGSSA AACRRAFDKP SAKDAIRTAG LATPDWVAIP KTTFRDLGTH AVLDAVSAAL PMPLFVKPAR GGSSLGAAAV HTREDLPSAM VACFAYDETA LIERHITGRE IAVSVVDTGT GPQALPAVEI VADSGVYDYA ARYTAGITEF FAPARLTAEE AKSVEQLAVR AHTTLDLSCV SRTDLILDAD GIPWFLEVNV APGLTETSLL PLAAGAADLD LGVLYRDLVQ AVIAE
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