Gene Caci_9035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_9035 
Symbol 
ID8340430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10442964 
End bp10444268 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content67% 
IMG OID644962127 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003119689 
Protein GI256398125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0246012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATC TCCGGGAGTT GCTGCGATCG GGGCTCTTCC GGCGGCTGTT CGCGACCCGC 
CTGATCGGCC AGTTCGGCGA CGGCGTGTTC CAGGTGGCCC TGGCGGCCTT CGTCGTGTTC
TCCCCGCAGA AGGAGGCGAC GGCCGCGGAG GTCGCGAAAG CGTTCGCGCT TCTGCTGGTC
CCCTTCACGG TCATCGGGCC GTTCGCCGGA GTCTTCTTGG ACCGGTGGCG CCGTCGGCAG
GTGCTGCTCT ACGCCAACGT CATGCGCGCC GGGATCGTGC TGATCGTGGC GGCCCAAGTC
CTCGCCGGAC ACAGCGGAAT CCTCTTCTAC GCCTCCGCTC TAGGGGTTCT CAGCTGCAAC
CGCTTCATCC TCGCCGGATT GTCGGCCGCT CTTCCACAGG CTGTGGATAA CAAACGGCTC
GTCGTCGCCA ACGCGGTCTC GCCGACCGCC GGAACACTCG CCGCGACCCT CGGCGGCTCC
GTGGGAGTCG TGGTCCGCGC ACTCGTCGGA TCCGGGGACA GAGCCAACGC CCTCATCCTC
GTCGTCGCCG CTGTCCTCTA TATGGCGGGC GGTCTAGTAG CCCGCACCAT GAAGCGCGAC
TCCCTGGGTC CGGACCAGAG CCCAGGAACC TCCACATGGA GCGAGCTGAA GGTCGTGGCG
CGCGGACTAG TGGAGGGCTT GGAGCATCTG AAGGAACGCA AGCCCGCGGC CGCGGCGCTG
GCCGCGATCA CCGCCAACCG CTTCTGCTAC GGCCTGACGA CCATCATGGT CCTGCTGTTG
TTCCGCAACA CCTTCAACGA CCCGCAGGAC ACCAACGCCG GTCTGCGCGG CTTCGGAACA
GCGGTCGCCG TCTCCGGATT CGGCTACTTC ATCGCCGCCT TCGCCTCGCC GATCATCTTG
CGCCACGTGA GGTTCTCCAC CTGGATCACG GTCTGCATGA TCGGATCCGG GGTCGCGCTG
GCCGCCTCCG CCGGCTGGTG GCGCGTCGTC CCGCTGCTGA TCGGCGCGCT CGTCCTGGGG
TTCCTGGCGC AGGGGCAGAA GATCTGTACC GACACCACTG TGCAGCGCAA TGTGGAGGAC
TCTTATAGAG GACGCGTGTT CTCGCTCTAC GACATGCTCT TCAACGGCGC GTTCGTCGCG
GCGGCCGCTG TGGCCGCCGC GACGCTGCCG GCGTCCGGGA AGTCGACGGC GCTCCTGTAC
GCGACCGTCG CCGTGTACCT GGTGACCGGA ATCGCTTATG CCTGGTTCCG CGCGGCTTCC
CGCTCGGCCC ACCACGACCG CAGTTCCGTC TCCGCCGTCT CGTGA
 
Protein sequence
MSDLRELLRS GLFRRLFATR LIGQFGDGVF QVALAAFVVF SPQKEATAAE VAKAFALLLV 
PFTVIGPFAG VFLDRWRRRQ VLLYANVMRA GIVLIVAAQV LAGHSGILFY ASALGVLSCN
RFILAGLSAA LPQAVDNKRL VVANAVSPTA GTLAATLGGS VGVVVRALVG SGDRANALIL
VVAAVLYMAG GLVARTMKRD SLGPDQSPGT STWSELKVVA RGLVEGLEHL KERKPAAAAL
AAITANRFCY GLTTIMVLLL FRNTFNDPQD TNAGLRGFGT AVAVSGFGYF IAAFASPIIL
RHVRFSTWIT VCMIGSGVAL AASAGWWRVV PLLIGALVLG FLAQGQKICT DTTVQRNVED
SYRGRVFSLY DMLFNGAFVA AAAVAAATLP ASGKSTALLY ATVAVYLVTG IAYAWFRAAS
RSAHHDRSSV SAVS