Gene Caci_9028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_9028 
Symbol 
ID8340422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10435781 
End bp10436161 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content73% 
IMG OID644962119 
Producthypothetical protein 
Protein accessionYP_003119682 
Protein GI256398118 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTTCC CCGATGAGAC CGGGCCCGGT GGCGGGATGC CGGACCTCGG CGGCATGGAC 
CTGCAGGGCA TGCTCGGCCA GGCCATGCAG ATGCAGCAGC GCATGGTCGA GGCGCAGCAG
GAACTGGAGC GCACGATCGT CTCCGGCAGC GCCGGCGGCG GTCTGGTGAC CGCCAAGGTG
ACCGGCACCG GGGACCTGGT GGGTCTGGAC ATCAAGCCCG AGGCCGCCGA CCCCGAGGAC
ACCGAGACGC TGGCCGACCT GGTGATCGCC GCGGTGCGCG ACGCGCGCGC GGCGGCGGAC
AAGCTGGCCG CGGACAAGAT GGGCCCGCTG GCCGGCGGCG GGATGCCCGA CCTGGGCAAC
CTCGGCAATC TGTTCGGCTG A
 
Protein sequence
MAFPDETGPG GGMPDLGGMD LQGMLGQAMQ MQQRMVEAQQ ELERTIVSGS AGGGLVTAKV 
TGTGDLVGLD IKPEAADPED TETLADLVIA AVRDARAAAD KLAADKMGPL AGGGMPDLGN
LGNLFG