Gene Caci_8972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8972 
Symbol 
ID8340365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10382650 
End bp10383744 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content67% 
IMG OID644962062 
ProductRadical SAM domain protein 
Protein accessionYP_003119626 
Protein GI256398062 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0215472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCGA CACTCACCGC CGACGCAGTA CACGCCACGG CGGTCAAGGA GCCGTTCCTG 
TTCTTGTACA TCACCGAGCA CTGCCAACTG CGCTGCAAGC ACTGCTACAT GGGCGACCGG
CTGGACATGG CCAGGCGCAT GACCCCTGAG AGGGTGGAGG AGATCCTGTC CACCCTGCGG
ATCGCGTACG GCCAGTACAA GGTCTACCTG CTCGGCGGTG AGCCGACCAC ACACCCGCAG
CTCGAACAGA TCCTGGACAT CTGCGAGCAG CAGAACTACA AGGTCGTGCT CACCTCCAAC
GGGCTGATCC CTCAGAAGGT CTGGCCGGTC CTCGAAGGCC GGCTGGACTC CTTCTCCTTC
TCTATGGACG GCGCCCGCGA GCAGACGCAT GAAGCGATGC GGGGTCCGAA CACGTGGCGA
CCGCTGGTGG GCAGCATGCG CCGCGCCATC GACGCGGGAT TCCAGACGCG CGCCATCTTC
ACGATCACGT CCGACAATGT GGCCGACGTC CAGGACGCGA TCGCCTTCGC CGACGATCTG
GGGCTGGAGA TGCTGTCCTT CCACTACTTC ACCCCGACCG GGCTCGGCCT GGACAAGCCG
CACCTTCAGC TCCCGCCCGA GCGATGGATG GAACTGTGCG ACCAGATCAC CGGCTGGGCC
GCCGGGCGCC GGCTCCGGGT GTTCTTCCCT CCGTCCTTCG TCCCCGCCGC CCGTCTGCCG
GTCCTGGCCG CCCAGGGCTA CCGAGGCTGC ACCGCCCGGA ATCTCGAACG CCTGGCGATC
TTCCCGGACG GCCGGGTGTA CATCTGCTCG GCGTTCTTCG ACACCGATCT GCACTACGGC
ACGTTCCGCG ACGGCGTCAT TGAGCCGCGC ACAGCCACGG GGCCGACCGA GCTGACGCTC
GTCAACAAGA TCTCCGCGAA CTGCCGGGGG TGCGGCCACG CCGACGTGTG CGGGGGAGGT
TGCGCGGCCT ACGACCACCT CAACCGCACG CTGGTCAGCT CCGAATGCGA CCGGACAACC
ATTCCGATCT GCCCCCTGTG GTCGATGCCC GCCGAGCCGG CGAACACCGA GCACCGACTC
GTCGACCTTC GCTGA
 
Protein sequence
MPATLTADAV HATAVKEPFL FLYITEHCQL RCKHCYMGDR LDMARRMTPE RVEEILSTLR 
IAYGQYKVYL LGGEPTTHPQ LEQILDICEQ QNYKVVLTSN GLIPQKVWPV LEGRLDSFSF
SMDGAREQTH EAMRGPNTWR PLVGSMRRAI DAGFQTRAIF TITSDNVADV QDAIAFADDL
GLEMLSFHYF TPTGLGLDKP HLQLPPERWM ELCDQITGWA AGRRLRVFFP PSFVPAARLP
VLAAQGYRGC TARNLERLAI FPDGRVYICS AFFDTDLHYG TFRDGVIEPR TATGPTELTL
VNKISANCRG CGHADVCGGG CAAYDHLNRT LVSSECDRTT IPICPLWSMP AEPANTEHRL
VDLR