| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8946 |
|---|
| Symbol | |
|---|
| ID | 8340339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 10358822 |
|---|
| End bp | 10359877 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644962036 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003119600 |
|---|
| Protein GI | 256398036 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00178879 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.674352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGGG AAATCGAGAA ACACAGGCGT AGTCGTCTCC TGCGATGGCC GACCAAGGTA
GCCCGGACCC GCATCTACCA GCCGGCACCG TTCGCGGCCA TCTACACGGC ACTTCTCATC
GCCGGCGTCT TCGGAGCGAT GGTTGTGTAC TTCCTGCTGC TGACGTTCGT CCCCGGTGCC
AAGTCGGCGC GGTTGGACGT GGCGAAGACG TCGCTATTGG TGGTCGGCGG GTCTGGAGCT
GTCGCGGGGC TGTACGTGGC GTACCGGAAG CAGCGCACCG ATGAGGCGAC GCATGTCCGG
GACCAGGACA AGCTCTTCAC GGAACGCTAC ACACAAGCCG TGGCCCAGCT CGGTAGTGAC
AAGGCTGCCG TTCGCCTCGG TGGCGTCTAC GCCCTGGCCC GGATCGCTGA TGATTCGGAA
CGCGACCGGC CGACGTGCTT GAAAGTTCTG TGTGCGTACT TGCGGATGCC TTACGATCCG
AACCCGGACA CTGGCGACAA GGCTGAGCGC GAGGTGCGTA CAACGGCTCA GATGGTGCTC
GCTGAGCGGC TACGTCCTGG TCACCCTGGC TTCTGGCGTT TCGCTGAAGT CGATCTGAGC
CACGCCAGTC TCTTCAACTT GGACTTCTCC AATGTAGAGA TCGACGAGTT TCGCGCCGTG
AAGGTGACGT TCCAAGGGGT TGCCAGCTTC GATGAGGCGA CGTTCCATGC GCTTCTCGAT
TTCGAGCAGG TGACTTTCGA GGAGTACGTC ACATTCCGCA AGTCCACTTT TCACGGAGTC
GCCTGGTTTA GCGAGGCAGT GTTTCACGGG GGGTGCGTGT TCAACCAGTC AGTGTTTGAT
GGCGAGGTAC TCTTCAACGG GGCGTCATTT GAGCAGGGTG GTTCATTCGA TGAGTCGACG
TTCCGAGGCG ACGTCATCAG GTTCAACGGG GCAACTCTCG GATCGAAGGC CCTCACTTTC
AGCCGAGCGC GACTCGGCCG CGAGCGTCTA CTGCTTTGGC CGGATGGGTT CGCAGAGCCA
GACGACATCG AGTGGTTGCC AGCTGGCACA GCATGA
|
|---|
| Protein sequence | MGGEIEKHRR SRLLRWPTKV ARTRIYQPAP FAAIYTALLI AGVFGAMVVY FLLLTFVPGA
KSARLDVAKT SLLVVGGSGA VAGLYVAYRK QRTDEATHVR DQDKLFTERY TQAVAQLGSD
KAAVRLGGVY ALARIADDSE RDRPTCLKVL CAYLRMPYDP NPDTGDKAER EVRTTAQMVL
AERLRPGHPG FWRFAEVDLS HASLFNLDFS NVEIDEFRAV KVTFQGVASF DEATFHALLD
FEQVTFEEYV TFRKSTFHGV AWFSEAVFHG GCVFNQSVFD GEVLFNGASF EQGGSFDEST
FRGDVIRFNG ATLGSKALTF SRARLGRERL LLWPDGFAEP DDIEWLPAGT A
|
|---|
| |