Gene Caci_8864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8864 
Symbol 
ID8340257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10276792 
End bp10277400 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID644961954 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003119518 
Protein GI256397954 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC ACCACACGCC GAGCCGTCGC GCCGCTCAGA GCAAGGGCGA CCTGCGGGAG 
CGGGCCATCC TCGACACCTG CGAAGCCCTG CTGACGGACA AGGGCTACGA CGCCGTGACC
GTCGGCGACA TCGCGCAGGG CGCCGGCATC ACCCGCGGAG CGCTGTACTT CTACTTCGGC
TCCAAGCAGG AAGTGGTCAC CGCGCTCGTG GCACGAACCG TCGAGCACCT CTGGGAGAGG
TCCCGTTCCA CGGCCCGGGC CGACGTGCCG CGCCAAGCCA TCGCCACGGC GATGCGGCGC
ACGGTCGAGC TGTGGAACGA GCACGGTCCG GTCATGCGCA CGGCGATCGA CCTGTCCCTG
ACCGTCCCGG AGATCGGCAA CCTGTGGAAC CAGACCGCCG ACCTGTTCAT CGAGGCGATC
GCCGCCGTAT TGGAGCACGC CGGAGTCGAG CCCGGCGACG AGCCGAAACA GGCTTCTGCG
ATGGCTCGCG CGCTGTGCTG GATGATCGAG CGGAACTTCT ACCACGCCTC GCAGGAGTCC
CGCGAAAGCC TGCAGAACAC CTCCGATACG TGCGAACACA TCTGGCTGAT CAGCAGCGGT
CTGTCCTGA
 
Protein sequence
MSGHHTPSRR AAQSKGDLRE RAILDTCEAL LTDKGYDAVT VGDIAQGAGI TRGALYFYFG 
SKQEVVTALV ARTVEHLWER SRSTARADVP RQAIATAMRR TVELWNEHGP VMRTAIDLSL
TVPEIGNLWN QTADLFIEAI AAVLEHAGVE PGDEPKQASA MARALCWMIE RNFYHASQES
RESLQNTSDT CEHIWLISSG LS